Mercurial > repos > bgruening > hicup_digester

annotate test-data/HiCUP_summary_report.txt @ 6:8b1d0e4e8f22 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/hicup commit 50173a1994a72d9774fd46777de94dd02d35bd42
author bgruening
date Mon, 24 Oct 2022 16:15:04 +0000
parents 2edfb71706b3
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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2edfb71706b3 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/hicup commit 5466e3345d762ed53686d80568929c2e15652eef
bgruening
parents: 4
diff changeset
1 File Total_Reads_1 Total_Reads_2 Not_Truncated_Reads_1 Not_Truncated_Reads_2 Truncated_Read_1 Truncated_Read_2 Average_Length_Truncated_1 Average_Length_Truncated_2 Too_Short_To_Map_Read_1 Too_Short_To_Map_Read_2 Unique_Alignments_Read_1 Unique_Alignments_Read_2 Multiple_Alignments_Read_1 Multiple_Alignments_Read_2 Failed_To_Align_Read_1 Failed_To_Align_Read_2 Paired_Read_1 Paired_Read_2 Valid_Pairs Valid_Cis_Close Valid_Cis_Far Valid_Trans Invalid_Pairs Same_Circularised Same_Dangling_Ends Same_Fragment_Internal Re_Ligation Contiguous_Sequence Wrong_Size Deduplication_Read_Pairs_Uniques Deduplication_Cis_Close_Uniques Deduplication_Cis_Far_Uniques Deduplication_Trans_Uniques Percentage_Mapped Percentage_Valid Percentage_Uniques Percentage_Unique_Trans Percentage_Ditags_Passed_Through_HiCUP
2edfb71706b3 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/hicup commit 5466e3345d762ed53686d80568929c2e15652eef
bgruening
parents: 4
diff changeset
2 dataset1_2.hicup.bam 99742 99742 92512 92628 7230 7114 22.45 22.63 2658 2476 3885 3725 12437 12679 80762 80862 1143 1143 544 44 440 60 599 21 73 466 39 0 0 544 44 440 60 1.15 47.59 100.00 11.03 0.55