Mercurial > repos > bgruening > hicup_digester

view test-data/dataset.contiguous.filter.sam @ 1:e2767f2e41fd draft

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planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b4d9ad47b45abb117a059214e1f7b29d084b4ca3
author bgruening
date Sat, 19 Aug 2017 07:39:06 -0400
parents a47a96d2721a
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@HD	VN:1.0	SO:unsorted
@SQ	SN:chr1	LN:199950
@PG	ID:bowtie2	PN:bowtie2	VN:2.3.0	CL:"/home/wolffj/miniconda2/envs/hicup/bin/bowtie2-align-s --wrapper basic-0 --very-sensitive -x genome -p 1 - --passthrough"
@PG	ID:HiCUP Mapper	VN:0.5.9
@PG	ID:HiCUP Truncater	VN:0.5.9	DS:"Restriction enzyme --re1 A^AGCTT"
@PG	ID:HiCUP Filter	VN:0.5.9	DS:"Max insert 0 Min insert 0 Digest file digest_file.txt"