Mercurial > repos > bgruening > hicup_filter

comparison hicup_filter.xml @ 7:2d4a34c00c67 draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/hicup commit 398a2e3e845ada656b3a7e0a6542e1668a8bcf17
author bgruening
date Thu, 23 Feb 2023 18:06:05 +0000
parents daf29b40670f
children
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6:6c26354dabe0 7:2d4a34c00c67
46 <data name="ditag_size_distribution" format="svg" from_work_dir="*.ditag_size_distribution.svg" label="Ditag size distribution" /> 46 <data name="ditag_size_distribution" format="svg" from_work_dir="*.ditag_size_distribution.svg" label="Ditag size distribution" />
47 </outputs> 47 </outputs>
48 <tests> 48 <tests>
49 <test> 49 <test>
50 <param name="inputFiles" value="dataset1_2.pair.bam" ftype="qname_sorted.bam" /> 50 <param name="inputFiles" value="dataset1_2.pair.bam" ftype="qname_sorted.bam" />
51 <param name="digest" value="digester_file.txt" ftype="tabular" /> 51 <param name="digest" value="digest_file.txt" ftype="tabular" />
52 <output name="hicup_filter_summary"> 52 <output name="hicup_filter_summary">
53 <assert_contents> 53 <assert_contents>
54 <has_text_matching expression="\s+1143\s+544\s+44\s+440\s+60\s+599\s+21\s+73\s+466\s+39\s+0\s+0"/> 54 <has_text_matching expression="\s+1143\s+544\s+44\s+440\s+60\s+599\s+21\s+73\s+466\s+39\s+0\s+0"/>
55 </assert_contents> 55 </assert_contents>
56 </output> 56 </output>