Mercurial > repos > bgruening > hicup_hicup

diff hicup_hicup.xml @ 2:e96cb39c3f8e draft

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planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit c546c919808a853d3e1556cb28bb4a5f7e1f9932
author bgruening
date Tue, 07 Nov 2017 02:48:23 -0500
parents 7e9e8da0522d
children bd1594d55a38
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--- a/hicup_hicup.xml	Sat Aug 19 07:39:34 2017 -0400
+++ b/hicup_hicup.xml	Tue Nov 07 02:48:23 2017 -0500
@@ -1,4 +1,4 @@
-<tool id="hicup_hicup" name="Hicup Pipeline" version="0.1.0">
+<tool id="hicup_hicup" name="Hicup Pipeline" version="@VERSION@.0">
     <description>controls the other programs in the HiCUP pipeline.</description>
     <macros>
         <import>hicup_macros.xml</import>
@@ -99,7 +99,7 @@
         <section name="advanced_options" title="Advanced options">
             <expand macro="re2" />
             <expand macro="filter_longest_shortest" />
-            <expand macro="no_fill" />     
+            <expand macro="no_fill" />
         </section>
     </inputs>
     <outputs>
@@ -134,7 +134,7 @@
 
             <!-- outputs -->
             <output name="hicup_results" file="results.html" ftype="html" lines_diff="10000"/>
-            <output name="dataset_hicup" file="dataset.hicup.sam" lines_diff="5" />
+            <output name="dataset_hicup" file="dataset.hicup.sam" lines_diff="10" />
             <output name="hicup_report" file="HiCUP_summary_report.txt" lines_diff="2"/>
             
             <output_collection name="intermediate_results">