Mercurial > repos > bgruening > hicup_truncater
comparison hicup_truncater.xml @ 7:cc413be789ea draft default tip
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/hicup commit 398a2e3e845ada656b3a7e0a6542e1668a8bcf17
author | bgruening |
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date | Thu, 23 Feb 2023 18:02:58 +0000 |
parents | 30b199ed897d |
children |
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6:71278c4f1b2e | 7:cc413be789ea |
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51 </assert_contents> | 51 </assert_contents> |
52 </output> | 52 </output> |
53 <output name="dataset1_trunc" file="dataset1.trunc.fastq.gz" decompress="true"/> | 53 <output name="dataset1_trunc" file="dataset1.trunc.fastq.gz" decompress="true"/> |
54 <output name="dataset2_trunc" file="dataset2.trunc.fastq.gz" decompress="true"/> | 54 <output name="dataset2_trunc" file="dataset2.trunc.fastq.gz" decompress="true"/> |
55 <output_collection name="truncation_barchart" count="2"> | 55 <output_collection name="truncation_barchart" count="2"> |
56 <element name="dataset1.fq" file="dataset1.truncation_barchart.svg" ftype="svg" compare="sim_size"/> | 56 <element name="dataset1.fq" file="dataset1.fastq.truncation_barchart.svg" ftype="svg" compare="sim_size"/> |
57 <element name="dataset2.fq" file="dataset2.truncation_barchart.svg" ftype="svg" compare="sim_size"/> | 57 <element name="dataset2.fq" file="dataset2.fastq.truncation_barchart.svg" ftype="svg" compare="sim_size"/> |
58 </output_collection> | 58 </output_collection> |
59 </test> | 59 </test> |
60 <test> | 60 <test> |
61 <conditional name="library"> | 61 <conditional name="library"> |
62 <param name="type" value="paired_collection"/> | 62 <param name="type" value="paired_collection"/> |
77 <output_collection name="dataset_trunc_pairs" type="paired" count="2"> | 77 <output_collection name="dataset_trunc_pairs" type="paired" count="2"> |
78 <element name="forward" decompress="true" file="dataset1.trunc.fastq.gz" ftype="fastq.gz"/> | 78 <element name="forward" decompress="true" file="dataset1.trunc.fastq.gz" ftype="fastq.gz"/> |
79 <element name="reverse" decompress="true" file="dataset2.trunc.fastq.gz" ftype="fastq.gz"/> | 79 <element name="reverse" decompress="true" file="dataset2.trunc.fastq.gz" ftype="fastq.gz"/> |
80 </output_collection> | 80 </output_collection> |
81 <output_collection name="truncation_barchart" count="2"> | 81 <output_collection name="truncation_barchart" count="2"> |
82 <element name="dataset1.fq" file="dataset1.truncation_barchart.svg" ftype="svg" compare="sim_size"/> | 82 <element name="dataset1.fq" file="dataset1.fastq.truncation_barchart.svg" ftype="svg" compare="sim_size"/> |
83 <element name="dataset2.fq" file="dataset2.truncation_barchart.svg" ftype="svg" compare="sim_size"/> | 83 <element name="dataset2.fq" file="dataset2.fastq.truncation_barchart.svg" ftype="svg" compare="sim_size"/> |
84 </output_collection> | 84 </output_collection> |
85 </test> | 85 </test> |
86 </tests> | 86 </tests> |
87 <help><![CDATA[ | 87 <help><![CDATA[ |
88 | 88 |