Mercurial > repos > bgruening > infernal
annotate test-data/cmsearch_result_tRNA5_mrum.out @ 8:c9e29ac5d099 draft default tip
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit a812ed8de433ac4e8b42afd636e70cfbb180d2b9"
author | bgruening |
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date | Thu, 23 Sep 2021 19:38:58 +0000 |
parents | 6e18e0b098cd |
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rev | line source |
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5
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
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changeset
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1 # cmsearch :: search CM(s) against a sequence database |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
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2 # INFERNAL 1.1 (June 2012) |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
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3 # Copyright (C) 2012 Howard Hughes Medical Institute. |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
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changeset
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4 # Freely distributed under the GNU General Public License (GPLv3). |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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5 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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6 # query CM file: tRNA5.c.cm |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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7 # target sequence database: mrum-genome.fa |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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8 # number of worker threads: 2 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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9 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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10 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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11 Query: tRNA5 [CLEN=72] |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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12 Hit scores: |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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13 rank E-value score bias sequence start end mdl trunc gc description |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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14 ---- --------- ------ ----- ----------- ------- ------- --- ----- ---- ----------- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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15 (1) ! 1.3e-18 71.5 0.0 NC_013790.1 362026 361955 - cm no 0.50 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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16 (2) ! 3.3e-18 70.2 0.0 NC_013790.1 2585265 2585193 - cm no 0.60 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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17 (3) ! 9e-18 68.8 0.0 NC_013790.1 762490 762562 + cm no 0.67 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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18 (4) ! 9e-18 68.8 0.0 NC_013790.1 2041704 2041632 - cm no 0.67 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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19 (5) ! 2.5e-17 67.4 0.0 NC_013790.1 2351254 2351181 - cm no 0.62 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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20 (6) ! 3e-17 67.2 0.0 NC_013790.1 735136 735208 + cm no 0.59 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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21 (7) ! 5.2e-17 66.4 0.0 NC_013790.1 2186013 2185941 - cm no 0.53 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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22 (8) ! 1.6e-16 64.8 0.0 NC_013790.1 2350593 2350520 - cm no 0.66 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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23 (9) ! 2.8e-16 64.1 0.0 NC_013790.1 2585187 2585114 - cm no 0.59 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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24 (10) ! 9.1e-16 62.5 0.0 NC_013790.1 662185 662259 + cm no 0.61 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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25 (11) ! 1.2e-15 62.1 0.0 NC_013790.1 360887 360815 - cm no 0.55 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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26 (12) ! 1.6e-15 61.7 0.0 NC_013790.1 2350984 2350911 - cm no 0.53 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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27 (13) ! 3.3e-15 60.7 0.0 NC_013790.1 2186090 2186019 - cm no 0.54 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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28 (14) ! 4.1e-15 60.4 0.0 NC_013790.1 2680159 2680233 + cm no 0.67 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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29 (15) ! 7.9e-15 59.5 0.0 NC_013790.1 2749839 2749768 - cm no 0.53 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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30 (16) ! 7.9e-15 59.5 0.0 NC_013790.1 2749945 2749874 - cm no 0.53 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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31 (17) ! 9.8e-15 59.2 0.0 NC_013790.1 361676 361604 - cm no 0.51 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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32 (18) ! 1e-14 59.2 0.0 NC_013790.1 2585073 2584999 - cm no 0.60 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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33 (19) ! 1.1e-14 59.1 0.0 NC_013790.1 2130422 2130349 - cm no 0.59 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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34 (20) ! 1.2e-14 58.9 0.0 NC_013790.1 546056 545947 - cm no 0.61 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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35 (21) ! 3.9e-14 57.3 0.0 NC_013790.1 361915 361844 - cm no 0.42 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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36 (22) ! 5.1e-14 57.0 0.0 NC_013790.1 97724 97795 + cm no 0.49 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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37 (23) ! 6.1e-14 56.7 0.0 NC_013790.1 2350717 2350646 - cm no 0.68 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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38 (24) ! 8e-14 56.3 0.0 NC_013790.1 1873887 1873815 - cm no 0.64 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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39 (25) ! 1.4e-13 55.6 0.0 NC_013790.1 360730 360659 - cm no 0.40 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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40 (26) ! 3.5e-13 54.3 0.0 NC_013790.1 2680310 2680384 + cm no 0.52 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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41 (27) ! 3.6e-13 54.3 0.0 NC_013790.1 2664806 2664732 - cm no 0.60 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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42 (28) ! 3.6e-13 54.3 0.0 NC_013790.1 361061 360989 - cm no 0.41 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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43 (29) ! 7.5e-13 53.3 0.0 NC_013790.1 2130335 2130262 - cm no 0.55 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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44 (30) ! 7.6e-13 53.3 0.0 NC_013790.1 2151672 2151745 + cm no 0.65 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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45 (31) ! 2.9e-12 51.4 0.0 NC_013790.1 319297 319370 + cm no 0.62 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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46 (32) ! 3.7e-12 51.1 0.0 NC_013790.1 361753 361679 - cm no 0.55 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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47 (33) ! 3.8e-12 51.1 0.0 NC_013790.1 360983 360912 - cm no 0.50 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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48 (34) ! 5.9e-12 50.5 0.0 NC_013790.1 361456 361383 - cm no 0.50 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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49 (35) ! 7.4e-12 50.1 0.0 NC_013790.1 362798 362727 - cm no 0.51 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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50 (36) ! 8.7e-12 49.9 0.0 NC_013790.1 917722 917793 + cm no 0.61 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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51 (37) ! 1.1e-11 49.7 0.0 NC_013790.1 2583869 2583798 - cm no 0.51 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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52 (38) ! 1.3e-11 49.4 0.0 NC_013790.1 362324 362252 - cm no 0.51 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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53 (39) ! 1.3e-11 49.3 0.0 NC_013790.1 360811 360740 - cm no 0.42 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
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54 (40) ! 4.3e-11 47.7 0.0 NC_013790.1 1160526 1160609 + cm no 0.60 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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55 (41) ! 9.8e-11 46.6 0.0 NC_013790.1 362403 362331 - cm no 0.49 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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56 (42) ! 1.1e-10 46.5 0.0 NC_013790.1 2327124 2327042 - cm no 0.63 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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57 (43) ! 1.2e-10 46.4 0.0 NC_013790.1 995344 995263 - cm no 0.49 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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58 (44) ! 2.3e-10 45.5 0.0 NC_013790.1 256772 256696 - cm no 0.57 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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59 (45) ! 2.5e-10 45.3 0.0 NC_013790.1 2584830 2584758 - cm no 0.64 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
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60 (46) ! 6.1e-10 44.1 0.0 NC_013790.1 2351071 2350997 - cm no 0.59 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
61 (47) ! 6.5e-10 44.0 0.0 NC_013790.1 362552 362482 - cm no 0.55 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
62 (48) ! 5.2e-09 41.2 0.0 NC_013790.1 1064775 1064858 + cm no 0.63 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
63 (49) ! 1.2e-08 40.0 0.0 NC_013790.1 361222 361150 - cm no 0.45 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
64 (50) ! 1.2e-08 40.0 0.0 NC_013790.1 361369 361297 - cm no 0.60 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
65 (51) ! 4.8e-08 38.1 0.0 NC_013790.1 361596 361513 - cm no 0.61 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
66 (52) ! 3.2e-07 35.5 0.0 NC_013790.1 1913310 1913227 - cm no 0.64 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
67 (53) ! 2.6e-06 32.7 0.0 NC_013790.1 363464 363381 - cm no 0.51 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
68 (54) ! 3e-06 32.5 0.0 NC_013790.1 2584954 2584872 - cm no 0.58 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
69 ------ inclusion threshold ------ |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
70 (55) ? 0.027 20.0 0.0 NC_013790.1 363803 363716 - cm no 0.50 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
71 (56) ? 3.4 13.4 0.0 NC_013790.1 984373 984304 - cm no 0.53 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
73 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
74 Hit alignments: |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
75 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
76 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
77 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
78 (1) ! 1.3e-18 71.5 0.0 cm 1 72 [] 362026 361955 - .. 1.00 no 0.50 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
79 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
80 v v v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
81 (((((((,,<<<<_______>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
82 tRNA5 1 gCcggcAUAGcgcAgUGGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
83 G: G::AUAGC:CA+UGG AG:GCG:::G:CUG+CA :C:::AGGU : GGGUUCGAUUCCC :U::C :CA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
84 NC_013790.1 362026 GGAGCUAUAGCUCAAUGGCAGAGCGUUUGGCUGACAUCCAAAAGGUUAUGGGUUCGAUUCCCUUUAGCCCCA 361955 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
85 ************************************************************************ PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
86 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
87 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
88 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
89 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
90 (2) ! 3.3e-18 70.2 0.0 cm 1 72 [] 2585265 2585193 - .. 1.00 no 0.60 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
91 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
92 v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
93 (((((((,,<<<<___.____>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
94 tRNA5 1 gCcggcAUAGcgcAgU.GGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
95 GCCG:C:UAGC:CAGU GGUAG:GCG ::G:CUGU AA:C:: GGUC:::GGUUCGA +CC::::G:CGGC+ |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
96 NC_013790.1 2585265 GCCGUCGUAGCUCAGUaGGUAGAGCGUUCGGCUGUUAACCGAUUGGUCACAGGUUCGAGCCCUGUCGACGGCG 2585193 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
97 ************************************************************************* PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
98 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
99 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
100 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
101 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
102 (3) ! 9e-18 68.8 0.0 cm 1 72 [] 762490 762562 + .. 1.00 no 0.67 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
103 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
104 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
105 (((((((,,<<<<___.____>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
106 tRNA5 1 gCcggcAUAGcgcAgU.GGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
107 G::::C UAGC:CAGU GG AG:GCGC:::CCU+ CAAG:::GAGG CC:GGGUUC A UCCC:G G::::CA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
108 NC_013790.1 762490 GGGCCCGUAGCUCAGUuGGGAGAGCGCUGCCCUUGCAAGGCAGAGGCCCCGGGUUCAAAUCCCGGUGGGUCCA 762562 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
109 ************************************************************************* PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
110 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
111 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
112 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
113 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
114 (4) ! 9e-18 68.8 0.0 cm 1 72 [] 2041704 2041632 - .. 1.00 no 0.67 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
115 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
116 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
117 (((((((,,<<<<___.____>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
118 tRNA5 1 gCcggcAUAGcgcAgU.GGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
119 G::::C UAGC:CAGU GG AG:GCGC:::CCU+ CAAG:::GAGG CC:GGGUUC A UCCC:G G::::CA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
120 NC_013790.1 2041704 GGGCCCGUAGCUCAGUuGGGAGAGCGCUGCCCUUGCAAGGCAGAGGCCCCGGGUUCAAAUCCCGGUGGGUCCA 2041632 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
121 ************************************************************************* PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
122 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
123 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
124 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
125 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
126 (5) ! 2.5e-17 67.4 0.0 cm 1 72 [] 2351254 2351181 - .. 1.00 no 0.62 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
127 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
128 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
129 (((((((,,<<<<___..____>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
130 tRNA5 1 gCcggcAUAGcgcAgU..GGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
131 GCC :::U+GC:CAGU GGUAG:GCGC:AG:CU+ AA:CU:G GGUC :GGGUUC AUUCCC: ::: GGC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
132 NC_013790.1 2351254 GCCUCGGUGGCUCAGUcuGGUAGAGCGCGAGACUUGUAAUCUCGUGGUCGCGGGUUCAAUUCCCGUCCGGGGCU 2351181 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
133 ************************************************************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
134 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
135 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
136 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
137 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
138 (6) ! 3e-17 67.2 0.0 cm 1 72 [] 735136 735208 + .. 1.00 no 0.59 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
139 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
140 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
141 (((((((,,<<<<___.____>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
142 tRNA5 1 gCcggcAUAGcgcAgU.GGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
143 GCC::::U+GC:CAG GGUAG:GCGC:A:C+UG AAG:U:GA GUC:GGGGUUCGA UCCCC:::::GGC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
144 NC_013790.1 735136 GCCUUAGUGGCUCAGCcGGUAGAGCGCUACCUUGGUAAGGUAGAAGUCGGGGGUUCGAAUCCCCCCUAAGGCU 735208 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
145 ************************************************************************* PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
146 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
147 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
148 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
149 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
150 (7) ! 5.2e-17 66.4 0.0 cm 1 72 [] 2186013 2185941 - .. 1.00 no 0.53 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
151 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
152 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
153 (((((((,,<<<<___.____>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
154 tRNA5 1 gCcggcAUAGcgcAgU.GGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
155 GCC::::UAG::CAGU GG AG::CGCCAG:CUG+++A:CUGGA GUC:::GGUUC A UCC:::::::GGCA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
156 NC_013790.1 2186013 GCCAUGUUAGUUCAGUuGGGAGAACGCCAGACUGAAGAUCUGGAUGUCGCUGGUUCAAGUCCGGCACAUGGCA 2185941 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
157 ************************************************************************* PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
158 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
159 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
160 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
161 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
162 (8) ! 1.6e-16 64.8 0.0 cm 1 72 [] 2350593 2350520 - .. 1.00 no 0.66 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
163 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
164 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
165 (((((((,,<<<<___..____>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
166 tRNA5 1 gCcggcAUAGcgcAgU..GGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
167 G::::C:UAGC:CAGU GG AG:GCGC::G:CU+U AA:C::G GG C :GGGUUC AUUCCC: :G::::C+ |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
168 NC_013790.1 2350593 GGGCCCGUAGCUCAGUcuGGCAGAGCGCUUGGCUUUUAACCAAGCGGCCGCGGGUUCAAUUCCCGUCGGGCCCG 2350520 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
169 ************************************************************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
170 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
171 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
172 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
173 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
174 (9) ! 2.8e-16 64.1 0.0 cm 1 72 [] 2585187 2585114 - .. 1.00 no 0.59 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
175 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
176 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
177 (((((((,,<<<<___..____>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
178 tRNA5 1 gCcggcAUAGcgcAgU..GGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
179 G::::CAUAGC::AG GGUA::GCGC :G:CU + AA:C: GA GUC::GGGUUCGA UCCC::UG::::CA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
180 NC_013790.1 2585187 GGGCCCAUAGCUUAGCcaGGUAGAGCGCUCGGCUCAUAACCGGGAUGUCAUGGGUUCGAAUCCCAUUGGGCCCA 2585114 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
181 ************************************************************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
182 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
183 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
184 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
185 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
186 (10) ! 9.1e-16 62.5 0.0 cm 1 72 [] 662185 662259 + .. 1.00 no 0.61 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
187 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
188 v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
189 (((((((,,<<<<___..___._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
190 tRNA5 1 gCcggcAUAGcgcAgU..GGu.AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
191 :::::::U+GC CAG GGU AG GCGC::G:CUG+ AA:C::GAGGUCC:GGGUUCGA UCCC:G:::::::A |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
192 NC_013790.1 662185 AGGCUAGUGGCACAGCcuGGUcAGCGCGCACGGCUGAUAACCGUGAGGUCCUGGGUUCGAAUCCCAGCUAGCCUA 662259 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
193 ***************999********************************************************* PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
194 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
195 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
196 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
197 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
198 (11) ! 1.2e-15 62.1 0.0 cm 1 72 [] 360887 360815 - .. 1.00 no 0.55 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
199 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
200 v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
201 (((((((,,<<<<___.____>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
202 tRNA5 1 gCcggcAUAGcgcAgU.GGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
203 G:::: :U+G:::A+U GGUA:::CG:C::CCU+ C+AG::G:AG+ ::GGGUUCGA UCCC::: ::::CA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
204 NC_013790.1 360887 GGGCCUGUGGUCUAAUuGGUAUGACGUCUCCCUUGCGAGGAGAAGACUUUGGGUUCGACUCCCAACUGGUCCA 360815 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
205 ************************************************************************* PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
206 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
207 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
208 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
209 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
210 (12) ! 1.6e-15 61.7 0.0 cm 1 72 [] 2350984 2350911 - .. 1.00 no 0.53 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
211 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
212 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
213 (((((((,,<<<<___..____>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
214 tRNA5 1 gCcggcAUAGcgcAgU..GGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
215 :CCG:C:UAGC:CA+U GG AG:GCG:::G:CUGU++A:C:::A GU :::GGUUC A UCC::::G:CGG:A |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
216 NC_013790.1 2350984 CCCGACUUAGCUCAAUuuGGCAGAGCGUUGGACUGUAGAUCCAAAUGUUGCUGGUUCAAGUCCGGCAGUCGGGA 2350911 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
217 ************************************************************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
218 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
219 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
220 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
221 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
222 (13) ! 3.3e-15 60.7 0.0 cm 1 72 [] 2186090 2186019 - .. 1.00 no 0.54 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
223 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
224 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
225 (((((((,,<<<<_______>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
226 tRNA5 1 gCcggcAUAGcgcAgUGGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
227 G::::: U+::::AG GGUA::::+CC::C+UG+CA G::GG G+UC::G:GUUCGA UC:C:: :::::CA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
228 NC_013790.1 2186090 GGACCGGUGGUCUAGGGGUAUGAUACCUCCUUGACAUGGAGGUGAUCACGAGUUCGAAUCUCGUUCGGUCCA 2186019 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
229 ************************************************************************ PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
230 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
231 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
232 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
233 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
234 (14) ! 4.1e-15 60.4 0.0 cm 1 72 [] 2680159 2680233 + .. 0.99 no 0.67 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
235 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
236 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
237 (((((((,,<<<<___..___._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
238 tRNA5 1 gCcggcAUAGcgcAgU..GGu.AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
239 G::::C:UAGC::AG GG A::GCG:C:G:CU+ AA:C:G:AGG CC:GGGUUC A UCCC:G:G::::C+ |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
240 NC_013790.1 2680159 GGGCCCGUAGCCUAGCcuGGAuAGGGCGUCGGACUUCUAAUCCGAAGGCCCCGGGUUCAAAUCCCGGCGGGUCCG 2680233 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
241 ***************9999999***************************************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
242 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
243 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
244 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
245 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
246 (15) ! 7.9e-15 59.5 0.0 cm 1 72 [] 2749839 2749768 - .. 1.00 no 0.53 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
247 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
248 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
249 (((((((,,<<<<_______>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
250 tRNA5 1 gCcggcAUAGcgcAgUGGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
251 G::::C:U+::::AG GGUA::::+:C:::CU++CAA:::G: G+UC::G:GUUCGA UC:C:::G::::CA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
252 NC_013790.1 2749839 GGUUCCGUGGUCUAGGGGUAUGAUAUCUCGCUUACAACGAGAGGAUCGUGAGUUCGAAUCUCGCCGGAACCA 2749768 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
253 ************************************************************************ PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
254 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
255 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
256 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
257 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
258 (16) ! 7.9e-15 59.5 0.0 cm 1 72 [] 2749945 2749874 - .. 1.00 no 0.53 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
259 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
260 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
261 (((((((,,<<<<_______>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
262 tRNA5 1 gCcggcAUAGcgcAgUGGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
263 G::::C:U+::::AG GGUA::::+:C:::CU++CAA:::G: G+UC::G:GUUCGA UC:C:::G::::CA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
264 NC_013790.1 2749945 GGUUCCGUGGUCUAGGGGUAUGAUAUCUCGCUUACAACGAGAGGAUCGUGAGUUCGAAUCUCGCCGGAACCA 2749874 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
265 ************************************************************************ PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
266 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
267 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
268 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
269 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
270 (17) ! 9.8e-15 59.2 0.0 cm 1 72 [] 361676 361604 - .. 1.00 no 0.51 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
271 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
272 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
273 (((((((,,<<<<___.___._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
274 tRNA5 1 gCcggcAUAGcgcAgU.GGu.AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
275 GC::::AU+G G:A+U GG A:C C+:C:G:CU+UC+A:C:G: + C:GGGUUC A UCCC:GU::::GCA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
276 NC_013790.1 361676 GCUUCUAUGGGGUAAUcGGCaAACCCAUCGGACUUUCGAUCCGAUAA-UCCGGGUUCAAAUCCCGGUAGAAGCA 361604 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
277 ***********************************************.9************************* PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
278 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
279 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
280 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
281 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
282 (18) ! 1e-14 59.2 0.0 cm 1 72 [] 2585073 2584999 - .. 0.99 no 0.60 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
283 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
284 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
285 (((((((,,<<<<___..___.._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
286 tRNA5 1 gCcggcAUAGcgcAgU..GGu..AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
287 GC::::AU+::G:AGU GG A:C:: :C:GCCU+UC+AGC:G:AG+ C :GGGUUCGA UCCC: U::::GCA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
288 NC_013790.1 2585073 GCUCCGAUGGUGUAGUccGGCcaAUCAUUUCGGCCUUUCGAGCCGAAGA-CUCGGGUUCGAAUCCCGGUCGGAGCA 2584999 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
289 ********************9999*************************.************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
290 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
291 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
292 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
293 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
294 (19) ! 1.1e-14 59.1 0.0 cm 1 72 [] 2130422 2130349 - .. 1.00 no 0.59 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
295 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
296 v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
297 (((((((,,<<<<___..___._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
298 tRNA5 1 gCcggcAUAGcgcAgU..GGu.AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
299 GC:G:::UAG:: AG GGU A ::C C:A:CCUG CA+G:U:GAG+ CC:GGGUUC A UCCC:G:::C:GCA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
300 NC_013790.1 2130422 GCGGUGUUAGUCCAGCcuGGUuAAGACUCUAGCCUGCCACGUUAGAGA-CCCGGGUUCAAAUCCCGGACGCCGCA 2130349 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
301 ***************999******************************.************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
302 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
303 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
304 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
305 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
306 (20) ! 1.2e-14 58.9 0.0 cm 1 72 [] 546056 545947 - .. 0.98 no 0.61 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
307 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
308 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
309 (((((((,,<<<<___.___._>>>>,<<<<<___~~~~~~>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
310 tRNA5 1 gCcggcAUAGcgcAgU.GGu.AgcgCgccagccUg*[ 4]*gcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
311 GCCGG::U+GC:CAG GGU AG:GCGC::G:CU :C::GAG+UC::GGGUUCGA UCCC::::CCGGCA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
312 NC_013790.1 546056 GCCGGGGUGGCUCAGCuGGUuAGAGCGCACGGCUC*[40]*CCGUGAGAUCGCGGGUUCGAAUCCCGCCCCCGGCA 545947 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
313 ********************************995...*..*********************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
314 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
315 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
316 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
317 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
318 (21) ! 3.9e-14 57.3 0.0 cm 1 72 [] 361915 361844 - .. 1.00 no 0.42 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
319 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
320 v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
321 (((((((,,<<<<___.____>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
322 tRNA5 1 gCcggcAUAGcgcAgU.GGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
323 G:::::AUAG:::A+ GGUA:::C+ C G:CUGU AA:C G AG+ :G :GUUCGA UC: C:U:::::C+ |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
324 NC_013790.1 361915 GGUUCUAUAGUUUAACaGGUAAAACAACUGGCUGUUAACCGGCAGA-UAGGAGUUCGAAUCUUCUUAGAACCG 361844 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
325 **********************************************.9************************* PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
326 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
327 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
328 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
329 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
330 (22) ! 5.1e-14 57.0 0.0 cm 1 72 [] 97724 97795 + .. 1.00 no 0.49 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
331 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
332 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
333 (((((((,,<<<<______._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
334 tRNA5 1 gCcggcAUAGcgcAgUGGu.AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
335 ::::::AU+::G:A+UGG A:C::+C AG:CU U +A:CU G G+ C:::GGUUCGA UCC:::U::::::A |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
336 NC_013790.1 97724 AGUCCUAUGGUGUAAUGGCaAUCAUACGAGUCUCUGGAACUUGUGA-CUCCGGUUCGACUCCGGAUAGGACUA 97795 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
337 **********************************************.************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
338 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
339 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
340 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
341 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
342 (23) ! 6.1e-14 56.7 0.0 cm 1 72 [] 2350717 2350646 - .. 1.00 no 0.68 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
343 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
344 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
345 (((((((,,<<<<______._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
346 tRNA5 1 gCcggcAUAGcgcAgUGGu.AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
347 GCC::::U+::G:AG GG A:C::G:::GCCUGUC+AGC::: G+ C :GGGUUC A UCCC: ::::GGC+ |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
348 NC_013790.1 2350717 GCCCUGGUGGUGUAGGGGCuAUCAUGUGGGCCUGUCGAGCCCGCGA-CUCGGGUUCAAAUCCCGGCCAGGGCG 2350646 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
349 ******************99**************************.************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
350 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
351 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
352 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
353 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
354 (24) ! 8e-14 56.3 0.0 cm 1 72 [] 1873887 1873815 - .. 1.00 no 0.64 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
355 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
356 v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
357 (((((((,,<<<<___.____>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
358 tRNA5 1 gCcggcAUAGcgcAgU.GGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
359 G::::: UAG :CAG GG AG: CG:C::C+UG CA G::G:AGG CC:GGGUUC A UCCC:G :::::CA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
360 NC_013790.1 1873887 GGGCUGGUAGCUCAGAuGGGAGAUCGUCGCCUUGGCAUGGCGGAGGCCCCGGGUUCAAAUCCCGGUCAGUCCA 1873815 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
361 ***************99******************************************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
362 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
363 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
364 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
365 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
366 (25) ! 1.4e-13 55.6 0.0 cm 1 72 [] 360730 360659 - .. 1.00 no 0.40 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
367 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
368 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
369 (((((((,,<<<<______._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
370 tRNA5 1 gCcggcAUAGcgcAgUGGu.AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
371 G::G::AUA::::A+ GG A::::GC::G:CU ++A:C::GAG+ :: :GUUCGA UC: ::U::C::CA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
372 NC_013790.1 360730 GAAGAUAUAGUUUAACGGCaAGAAUGCUUGGCUCCAGACCAAGAGA-UGAGAGUUCGAAUCUUUCUAUCUUCA 360659 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
373 **********************************************.9************************* PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
374 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
375 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
376 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
377 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
378 (26) ! 3.5e-13 54.3 0.0 cm 1 72 [] 2680310 2680384 + .. 0.99 no 0.52 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
379 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
380 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
381 (((((((,,<<<<___..___._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
382 tRNA5 1 gCcggcAUAGcgcAgU..GGu.AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
383 :::::::UAGC::AG GG A::GCG::AG:CU AA:CU::AG+ C::GGGUUC A UCCC:::::::::+ |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
384 NC_013790.1 2680310 AGGCUUGUAGCCUAGCuuGGAuAAGGCGUUAGACUCCUAAUCUAAAGACCGCGGGUUCAAAUCCCGCCAAGCCUG 2680384 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
385 ***************9999999***************************************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
386 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
387 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
388 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
389 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
390 (27) ! 3.6e-13 54.3 0.0 cm 1 72 [] 2664806 2664732 - .. 1.00 no 0.60 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
391 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
392 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
393 (((((((,,<<<<___..___._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
394 tRNA5 1 gCcggcAUAGcgcAgU..GGu.AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
395 ::C:G::U+G G:AGU GGU A:C CGC::G:CU + AA:C::GAG+ CC:::GUUC A UC:::G::C:G::A |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
396 NC_013790.1 2664806 AGCAGGGUGGGGUAGUcuGGUgAUCCCGCGGGGCUCAUAACCCCGAGAGCCCUAGUUCAAAUCUAGGCCCUGCUA 2664732 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
397 *************************************************************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
398 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
399 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
400 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
401 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
402 (28) ! 3.6e-13 54.3 0.0 cm 1 72 [] 361061 360989 - .. 1.00 no 0.41 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
403 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
404 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
405 (((((((,,<<<<______._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
406 tRNA5 1 gCcggcAUAGcgcAgUGGu.AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
407 :: ::AUAGC::A+ GG A::GC+:C:::CU +A:::G:AG+U :GGGUUC A UCCC: U:: :: A |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
408 NC_013790.1 361061 GGAUCUAUAGCUUAACGGAaAAAGCAUCUAGCUACGGACUAGAAGAUUGUGGGUUCAAAUCCCAUUAGGUCUA 360989 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
409 *******************9***************************************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
410 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
411 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
412 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
413 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
414 (29) ! 7.5e-13 53.3 0.0 cm 1 72 [] 2130335 2130262 - .. 1.00 no 0.55 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
415 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
416 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
417 (((((((,,<<<<___..___._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
418 tRNA5 1 gCcggcAUAGcgcAgU..GGu.AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
419 GC:G:::U+G:::AGU GGU A:::C : :GCCU+ CAAGC: : + CC:GGGUUCGA UCCC:G:::C:GCA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
420 NC_013790.1 2130335 GCAGCUGUGGUAUAGUcuGGUuAUUACUUGGGCCUUCCAAGCCUACAA-CCCGGGUUCGAAUCCCGGCAGCUGCA 2130262 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
421 ************************************************.************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
422 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
423 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
424 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
425 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
426 (30) ! 7.6e-13 53.3 0.0 cm 1 72 [] 2151672 2151745 + .. 1.00 no 0.65 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
427 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
428 vv vv NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
429 (((((((,,<<<<___..____>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
430 tRNA5 1 gCcggcAUAGcgcAgU..GGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
431 G::::C:UAGC:CAGU GG AG:GCGC G:CU U AA:C G GUC :GGGUUC AU+CCC: :G::::C+ |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
432 NC_013790.1 2151672 GGGCCCGUAGCUCAGUcuGGCAGAGCGCUUGGCUCUUAACCUUGUUGUCGCGGGUUCAAUCCCCGUCGGGCCCG 2151745 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
433 ************************************************************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
434 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
435 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
436 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
437 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
438 (31) ! 2.9e-12 51.4 0.0 cm 1 72 [] 319297 319370 + .. 0.99 no 0.62 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
439 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
440 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
441 (((((((,,<<<<___..___._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
442 tRNA5 1 gCcggcAUAGcgcAgU..GGu.AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
443 GCC::::U+G:G:AG GG A:C:CG:::G:CUG +A:C::: CC:GGGUUC A UCCC:G::::GGCA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
444 NC_013790.1 319297 GCCCUGGUGGUGUAGCuuGGAuAACACGUGGGACUGCGGAUCCCAUUC-CCCGGGUUCAAAUCCCGGCCAGGGCA 319370 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
445 ***************9999999************************99.************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
446 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
447 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
448 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
449 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
450 (32) ! 3.7e-12 51.1 0.0 cm 1 72 [] 361753 361679 - .. 0.98 no 0.55 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
451 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
452 v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
453 (((((((,,<<<<___..___._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
454 tRNA5 1 gCcggcAUAGcgcAgU..GGu.AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
455 G :::::U+GC AGU G U A GCG:C:G:CU+U AA:C:G:AG+UC: GGGUUC A UCCC :::::: CA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
456 NC_013790.1 361753 GGGCCUGUGGCUAAGUcuGAUcAAGGCGUCCGGCUUUUAACCGGAAGAUCAGGGGUUCAAAUCCCUUCAGGCUCA 361679 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
457 ****************9888899**************************************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
458 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
459 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
460 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
461 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
462 (33) ! 3.8e-12 51.1 0.0 cm 1 72 [] 360983 360912 - .. 1.00 no 0.50 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
463 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
464 v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
465 (((((((,,<<<<___.____>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
466 tRNA5 1 gCcggcAUAGcgcAgU.GGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
467 GC:::::UA :G:A+U GG A:C: C ::CCU+ CAAG:: GA + C:GGGUUCGA UCCC:G:::::GCA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
468 NC_013790.1 360983 GCUUUAGUACUGUAAUuGGCAACACCCGCCCCUUCCAAGGGUGAAA-UCUGGGUUCGAAUCCCAGCUAAAGCA 360912 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
469 **********************************************.9************************* PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
470 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
471 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
472 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
473 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
474 (34) ! 5.9e-12 50.5 0.0 cm 1 72 [] 361456 361383 - .. 1.00 no 0.50 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
475 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
476 v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
477 (((((((,,<<<<___..____>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
478 tRNA5 1 gCcggcAUAGcgcAgU..GGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
479 :::::::U+GC: AG GGUA :GCGC::G CUG+ A C::G G+UC :GGGUUC A UCCC: :::::::A |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
480 NC_013790.1 361456 UGGUCUGUGGCCAAGCauGGUAAGGCGCUUGUCUGAUAUGCAAGUGAUCGAGGGUUCAAAUCCCUUCAGACCAA 361383 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
481 ***************999******************************************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
482 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
483 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
484 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
485 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
486 (35) ! 7.4e-12 50.1 0.0 cm 1 72 [] 362798 362727 - .. 1.00 no 0.51 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
487 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
488 v v v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
489 (((((((,,<<<<_______>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
490 tRNA5 1 gCcggcAUAGcgcAgUGGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
491 G::::::UAGC: AG GG A :GCG:CAG CUG+++A CUG: +UC:::GGUUC A UCC:::::::::CA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
492 NC_013790.1 362798 GGGGCAUUAGCUAAGCGGGAAAGCGACAGUCUGAAGAUCUGUUCAUCGCUGGUUCAAAUCCAGCAUGUCCCA 362727 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
493 ************************************************************************ PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
494 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
495 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
496 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
497 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
498 (36) ! 8.7e-12 49.9 0.0 cm 1 72 [] 917722 917793 + .. 1.00 no 0.61 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
499 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
500 v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
501 (((((((,,<<<<______._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
502 tRNA5 1 gCcggcAUAGcgcAgUGGu.AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
503 :::::C:U+: G:AGUGGU A:C : C G:CU+U +A:C GAG+ C G:GGUUCGA UCC:C :G:::::A |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
504 NC_013790.1 917722 AGUCCCGUGGGGUAGUGGUaAUCCUUCUAGGCUUUGGACCCGGAGA-CGGCGGUUCGACUCCGCUCGGGACUA 917793 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
505 **********************************************.************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
506 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
507 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
508 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
509 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
510 (37) ! 1.1e-11 49.7 0.0 cm 1 72 [] 2583869 2583798 - .. 0.99 no 0.51 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
511 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
512 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
513 (((((((,,<<<<_______>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
514 tRNA5 1 gCcggcAUAGcgcAgUGGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
515 GCC:::AUAGC::AG GG ::GCG:::G:CUG ++A:C::: C: G:GUUC A UC:C :U:::GGC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
516 NC_013790.1 2583869 GCCAAGAUAGCUUAGAGGCGAAGCGGUUGGCUGCAGACCAAUUACACGGGAGUUCAAAUCUCUCUCUUGGCU 2583798 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
517 *******************9**************************************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
518 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
519 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
520 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
521 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
522 (38) ! 1.3e-11 49.4 0.0 cm 1 72 [] 362324 362252 - .. 1.00 no 0.51 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
523 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
524 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
525 (((((((,,<<<<___.___._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
526 tRNA5 1 gCcggcAUAGcgcAgU.GGu.AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
527 ::::::AU+::G:A+ GG A:C:: CC:G:CU+U +A:C:GGAG+ ::::GUUCGA C::::U::::::A |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
528 NC_013790.1 362324 AGUUCUAUGGUGUAACuGGCaAUCAUUCCGGGCUUUGGACCCGGAGA-UUCCCGUUCGAGACGGGAUAGAACUA 362252 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
529 ***********************************************.9************************* PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
530 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
531 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
532 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
533 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
534 (39) ! 1.3e-11 49.3 0.0 cm 1 72 [] 360811 360740 - .. 0.99 no 0.42 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
535 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
536 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
537 (((((((,,<<<<___.____>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
538 tRNA5 1 gCcggcAUAGcgcAgU.GGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
539 GC: :::U+ :G:A+U GG A:C: +C::::CU+ AA::::GA C:GGGUUC A UCCC:G::: :GC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
540 NC_013790.1 360811 GCUUUAGUGUUGUAAUuGGAAACAAACACCUCUUCUAAAGGUGAAU-UCUGGGUUCAAGUCCCAGCUAGAGCU 360740 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
541 ********************************************66.************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
542 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
543 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
544 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
545 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
546 (40) ! 4.3e-11 47.7 0.0 cm 1 72 [] 1160526 1160609 + .. 0.97 no 0.60 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
547 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
548 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
549 (((((((,,<<<<___..____>>>>,<<<<<_______>>>>>,,,..........,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
550 tRNA5 1 gCcggcAUAGcgcAgU..GGuAgcgCgccagccUgucAagcuggAGg..........UCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
551 GCCG::AUAG ::AG GGUA:: CGC::G:CUG +AA:C::G G+ UCC:GGGUUC A UCCC:GU::CGGC+ |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
552 NC_013790.1 1160526 GCCGAGAUAGUCUAGCcuGGUAAGGCGCGGGACUGGAAAUCCCGUGAgggaaaccucUCCUGGGUUCAAAUCCCAGUCUCGGCG 1160609 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
553 ***************999***************************9878888888889************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
554 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
555 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
556 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
557 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
558 (41) ! 9.8e-11 46.6 0.0 cm 1 72 [] 362403 362331 - .. 1.00 no 0.49 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
559 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
560 v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
561 (((((((,,<<<<______.._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
562 tRNA5 1 gCcggcAUAGcgcAgUGGu..AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
563 G:::: :UAG:G:AGUGGU A:C:C :::GC+U+ +AGC:::A + C :::GUUC A UC::: : ::::CA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
564 NC_013790.1 362403 GGGAUUGUAGUGUAGUGGUcuAGCACCGUCGCUUUGGGAGCGACAAA-CUCAAGUUCAAAUCUUGGCUAUCCCA 362331 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
565 ***********************************************.************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
566 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
567 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
568 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
569 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
570 (42) ! 1.1e-10 46.5 0.0 cm 1 72 [] 2327124 2327042 - .. 0.93 no 0.63 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
571 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
572 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
573 (((((((,,<<<<___..____>>>>,<<<<<_______>>>>>,,,.,.........,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
574 tRNA5 1 gCcggcAUAGcgcAgU..GGuAgcgCgccagccUgucAagcuggAGg.U.........CCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
575 GCCG::AUAG ::AG GGUA:: CGC::G:CU+ +AA:C::G GG CC:GGGUUC A UCCC:GU::CGGC+ |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
576 NC_013790.1 2327124 GCCGAGAUAGUCUAGCcuGGUAAGGCGCGGGACUUGAAAUCCCGUGGg-uaccccccgCCUGGGUUCAAAUCCCAGUCUCGGCG 2327042 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
577 ***************999***************************973.455555555************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
578 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
579 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
580 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
581 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
582 (43) ! 1.2e-10 46.4 0.0 cm 1 72 [] 995344 995263 - .. 0.93 no 0.49 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
583 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
584 v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
585 (((((((,,<<<<______.._>>>>,<<<<<_______>>>>>,,,........,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
586 tRNA5 1 gCcggcAUAGcgcAgUGGu..AgcgCgccagccUgucAagcuggAGg........UCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
587 :::G:CAUAGCG AG GGU A CGCG:CAG:CU +++A:CUG: G+ UC:GGGGUUCGA UCCCC:UG:C:::A |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
588 NC_013790.1 995344 AGAGACAUAGCGAAGCGGUcaAACGCGGCAGACUCAAGAUCUGUUGAuuaguucuUCAGGGGUUCGAAUCCCCUUGUCUCUA 995263 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
589 **********************************************9444444445************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
590 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
591 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
592 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
593 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
594 (44) ! 2.3e-10 45.5 0.0 cm 1 72 [] 256772 256696 - .. 0.95 no 0.57 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
595 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
596 v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
597 (((((((,,<<<<___..___.._>>>>,<<<<<_______>>>>>,,,,,<<<<<_____.__>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
598 tRNA5 1 gCcggcAUAGcgcAgU..GGu..AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGA.UUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
599 G :::AUAG:::AGU GG A:::CG:::G:CU+ +A:C:::AGGUC:GGGGUUC A U+CCCC:U::: C |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
600 NC_013790.1 256772 GGGCCUAUAGUCUAGUcaGGAuuAUGACGUGGGACUUCGGAUCCCAAGGUCGGGGGUUCAAaUCCCCCCUAGGGUCC 256696 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
601 *****************988889************************************8626688999******** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
602 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
603 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
604 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
605 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
606 (45) ! 2.5e-10 45.3 0.0 cm 1 72 [] 2584830 2584758 - .. 1.00 no 0.64 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
607 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
608 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
609 (((((((,,<<<<___.___._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
610 tRNA5 1 gCcggcAUAGcgcAgU.GGu.AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
611 GCCGG :UA: G:AG GGU A:C :+C :G:CUGU +A:C: G G+ C :G GUUC A UC C: : CCGGC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
612 NC_013790.1 2584830 GCCGGGGUAGGGUAGGcGGUcAUCCUACGGGACUGUGGAUCCUGUGA-CUCGGGUUCAAAUCUCGGCUCCGGCC 2584758 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
613 ***********************************************.************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
614 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
615 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
616 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
617 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
618 (46) ! 6.1e-10 44.1 0.0 cm 1 72 [] 2351071 2350997 - .. 0.99 no 0.59 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
619 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
620 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
621 (((((((,,<<<<___..___.._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
622 tRNA5 1 gCcggcAUAGcgcAgU..GGu..AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
623 G::::CAUA: G:AG GGU A:C : : :GC+U+ +AGC: :AG+ C ::GGUUC A UCC:: UG::::CA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
624 NC_013790.1 2351071 GGGACCAUAGGGUAGCuuGGUcgAUCCUUUGGGCUUUGGGAGCCUGAGA-CUCCGGUUCAAAUCCGGGUGGUCCCA 2350997 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
625 ***************999*******************************.************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
626 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
627 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
628 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
629 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
630 (47) ! 6.5e-10 44.0 0.0 cm 1 72 [] 362552 362482 - .. 0.99 no 0.55 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
631 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
632 v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
633 (((((((,,<<<<_______>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
634 tRNA5 1 gCcggcAUAGcgcAgUGGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
635 ::C G::UAGC: AGUGGU :GCG:C:G:CUGU++A:C:G: + : GGGUUCGA UCCC :::C G::A |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
636 NC_013790.1 362552 CUCUGUGUAGCAAAGUGGUUAUGCGGCGGUCUGUAGAACCGUUUA-UGGGGGUUCGAAUCCCUCCGCGGAGA 362482 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
637 *******************679***********************.9************************* PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
638 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
639 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
640 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
641 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
642 (48) ! 5.2e-09 41.2 0.0 cm 1 72 [] 1064775 1064858 + .. 0.97 no 0.63 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
643 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
644 v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
645 (((((((,,<<<<___..____>>>>,<<<<<_______>>>>>,,,,..........,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
646 tRNA5 1 gCcggcAUAGcgcAgU..GGuAgcgCgccagccUgucAagcuggAGgU..........CCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
647 G CGG:AU+GC: AG GGUA :GCG:C:G:CUG AA:C:G: G+U CCGGGGUUC A UCCCCGU:CCG C+ |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
648 NC_013790.1 1064775 GUCGGGAUGGCCCAGCcuGGUACGGCGUCGGACUGCUAAUCCGAUGAUcaauagaucgCCGGGGUUCAAAUCCCCGUCCCGGCG 1064858 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
649 ***************999****************************988888888899************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
650 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
651 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
652 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
653 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
654 (49) ! 1.2e-08 40.0 0.0 cm 1 72 [] 361222 361150 - .. 0.98 no 0.45 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
655 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
656 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
657 (((((((,,<<<<.______._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
658 tRNA5 1 gCcggcAUAGcgc.AgUGGu.AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
659 G: ::::U+::G: A+UGG A:C::+C:AG CUGU +A CU:G GG ::GGGUUC A UCCC:::::: :C |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
660 NC_013790.1 361222 GAUGCAUUGGUGUuAAUGGCuAGCAUACAAGUCUGUGGAGCUUGUGG-AAAGGGUUCAAAUCCCUUAUGUGUCC 361150 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
661 ************85778**99**************************.************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
662 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
663 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
664 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
665 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
666 (50) ! 1.2e-08 40.0 0.0 cm 1 72 [] 361369 361297 - .. 0.99 no 0.60 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
667 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
668 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
669 (((((((,,<<<<______.._>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
670 tRNA5 1 gCcggcAUAGcgcAgUGGu..AgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
671 G C::::UA::::AGUGG A:::: C: G:+ GUCA :C :G + CC:GGGUUCGA UCCC:G::::G C+ |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
672 NC_013790.1 361369 GUCUCUGUAGUAUAGUGGCcuAGUAUCCAUGGUGGUCAGCCGUGGUA-CCCGGGUUCGAAUCCCGGCGGAGGCG 361297 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
673 ******************99************************999.************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
674 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
675 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
676 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
677 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
678 (51) ! 4.8e-08 38.1 0.0 cm 1 72 [] 361596 361513 - .. 0.84 no 0.61 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
679 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
680 NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
681 (((((((,,<<<<___..____>>>>,<<<<<_______>>>>>,,..,.........,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
682 tRNA5 1 gCcggcAUAGcgcAgU..GGuAgcgCgccagccUgucAagcuggAG..g.........UCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
683 G:CG:::U+GC::AG GGUA::GCG:::G CUG AA C::: G UC::GGGUUC A UCCC:::::CG:C+ |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
684 NC_013790.1 361596 GGCGUGGUGGCCUAGCucGGUAGGGCGGAGGGCUGCUAAUCCUCUGcg-auaaaacgcUCAUGGGUUCAAAUCCCAUCCACGCCG 361513 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
685 **************************9888888888888888887522.2333333339************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
686 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
687 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
688 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
689 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
690 (52) ! 3.2e-07 35.5 0.0 cm 1 72 [] 1913310 1913227 - .. 0.96 no 0.64 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
691 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
692 v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
693 (((((((,,<<<<______.._>>>>,<<<<<_______>>>>>,,,..........,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
694 tRNA5 1 gCcggcAUAGcgcAgUGGu..AgcgCgccagccUgucAagcuggAGg..........UCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
695 GC:GG::U+G : AG GGU A : CGC:AG:+UG+ + :CU:G GG UC :GGGUUCGAUUCCC: ::CC:GCA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
696 NC_013790.1 1913310 GCAGGGGUGGUCGAGCGGUcaAAGGCGCUAGGUUGAGGGCCUAGUGGguuagucccuUCGCGGGUUCGAUUCCCGUCCCCUGCA 1913227 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
697 **********************************************888888888889************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
698 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
699 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
700 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
701 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
702 (53) ! 2.6e-06 32.7 0.0 cm 1 72 [] 363464 363381 - .. 0.96 no 0.51 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
703 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
704 v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
705 (((((((,,<<<<___..____>>>>,<<<<<_______>>>>>,,,..........,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
706 tRNA5 1 gCcggcAUAGcgcAgU..GGuAgcgCgccagccUgucAagcuggAGg..........UCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
707 ::C:G::UAGC AG GGUA GC+C::G:CU++++A:C::G G+ UC::GGGUUC A UCCC::::C:G::A |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
708 NC_013790.1 363464 AGCCGAGUAGCUAAGCuuGGUAAGGCACUGGACUUAAGAUCCAGGGAguuagucuccUCAUGGGUUCAAAUCCCGUCUCGGCUA 363381 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
709 ***************999**************************99888888888889************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
710 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
711 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
712 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
713 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
714 (54) ! 3e-06 32.5 0.0 cm 1 72 [] 2584954 2584872 - .. 0.97 no 0.58 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
715 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
716 v v NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
717 (((((((,,<<<<______.._>>>>,<<<<<_______>>>>>,,,,.........,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
718 tRNA5 1 gCcggcAUAGcgcAgUGGu..AgcgCgccagccUgucAagcuggAGgU.........CCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
719 GC::G :U+ C: AG GG A :G G:CAG:CU++ +A:CUG: G+U CC:GGGUUCGA UCCC:G: C::GCA |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
720 NC_013790.1 2584954 GCGAGGGUGUCCGAGAGGCcaAAGGAGACAGGCUUAGGACCUGUUGAUgcagaucuaCCAGGGUUCGAAUCCCUGCUCUCGCA 2584872 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
721 ******************9999************************98888888888************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
722 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
723 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
724 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
725 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
726 (55) ? 0.027 20.0 0.0 cm 1 72 [] 363803 363716 - .. 0.71 no 0.50 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
727 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
728 vvvvv vvvvv NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
729 (((((((,,<~~~~~~>,<<<<<_~~~~~~>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
730 tRNA5 1 gCcggcAUAG*[13]*Cgccagcc*[ 6]*gcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
731 ::C:G::UAG C +C + +UC::GGGUUC A UCCC::::C:G::A |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
732 NC_013790.1 363803 AGCUGUGUAG*[22]*C---GGAC*[17]*-AGUCUCAUCAUGGGUUCAAAUCCCAUCGCAGCUA 363716 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
733 ********96...5..3...3333...5...34456679************************** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
734 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
735 >> NC_013790.1 Methanobrevibacter ruminantium M1 chromosome, complete genome |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
736 rank E-value score bias mdl mdl from mdl to seq from seq to acc trunc gc |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
737 ---- --------- ------ ----- --- -------- -------- ----------- ----------- ---- ----- ---- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
738 (56) ? 3.4 13.4 0.0 cm 1 72 [] 984373 984304 - .. 0.95 no 0.53 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
739 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
740 vvv vv vv vvv NC |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
741 (((((((,,<<<<___..____>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): CS |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
742 tRNA5 1 gCcggcAUAGcgcAgU..GGuAgcgCgccagccUgucAagcuggAGgUCCgggGUUCGAUUCcccGUgccgGca 72 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
743 : ::GC U+:C:CA U GG AG:G:GC G:+U U AA:C G G CG: G UC A UC :CG :: :A |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
744 NC_013790.1 984373 CUGAGCGUGGCUCACUauGGCAGAGUGCUUGGUUCUUAACCUUGUUG-UCGAGGGUCCAAUCUUCG---UCGGA 984304 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
745 **************9999*****************************.899999999999999999...799** PP |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
746 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
747 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
748 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
749 Internal CM pipeline statistics summary: |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
750 ---------------------------------------- |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
751 Query model(s): 1 (72 consensus positions) |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
752 Target sequences: 1 (5874406 residues searched) |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
753 Target sequences re-searched for truncated hits: 1 (360 residues re-searched) |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
754 Windows passing local HMM SSV filter: 11197 (0.2108); expected (0.35) |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
755 Windows passing local HMM Viterbi filter: (off) |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
756 Windows passing local HMM Viterbi bias filter: (off) |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
757 Windows passing local HMM Forward filter: 140 (0.002747); expected (0.005) |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
758 Windows passing local HMM Forward bias filter: 139 (0.002728); expected (0.005) |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
759 Windows passing glocal HMM Forward filter: 88 (0.001973); expected (0.005) |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
760 Windows passing glocal HMM Forward bias filter: 88 (0.001973); expected (0.005) |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
761 Envelopes passing glocal HMM envelope defn filter: 101 (0.001358); expected (0.005) |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
762 Envelopes passing local CM CYK filter: 60 (0.0007629); expected (0.0001) |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
763 Total CM hits reported: 56 (0.0007205); includes 0 truncated hit(s) |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
764 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
765 # CPU time: 2.66u 0.04s 00:00:02.70 Elapsed: 00:00:01.77 |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
766 // |
6e18e0b098cd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
bgruening
parents:
diff
changeset
|
767 [ok] |