Mercurial > repos > bgruening > infernal
view test-data/cmalign_input2_tRNA5.c.cm @ 5:6e18e0b098cd draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/infernal commit 80c721dcfe02a2b8baf8e2c64b76cbcd71b23d86
| author | bgruening |
|---|---|
| date | Sat, 21 Jan 2017 17:36:57 -0500 |
| parents | |
| children |
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INFERNAL1/a [1.1.1 | July 2014] NAME tRNA5 STATES 230 NODES 61 CLEN 72 W 89 ALPH RNA RF no CONS yes MAP yes DATE Mon Jun 27 12:35:45 2016 COM [1] ./src/cmbuild tRNA5.cm tutorial/tRNA5.sto COM [2] cmcalibrate tRNA5.cm PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 3.725586 CKSUM 3535941971 NULL 0.000 0.000 0.000 0.000 EFP7GF -5.5288 0.72958 ECMLC 0.85563 -4.01853 2.43520 1600000 300168 0.003998 ECMGC 0.39437 -17.41037 -4.06685 1600000 77168 0.005183 ECMLI 0.73047 -3.70982 3.57712 1600000 245977 0.004879 ECMGI 0.44078 -12.13534 -0.86006 1600000 57603 0.006944 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 89 108 -7.419 -8.664 -0.055 -5.118 IL 1 1 2 1 4 3 28 90 110 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 4 30 90 110 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 74 - a - - MR 3 2 3 5 5 4 32 89 108 -7.593 -0.028 -7.408 -7.620 -8.512 0.474 -1.199 0.305 -0.089 D 4 2 3 5 5 1 24 87 107 -5.352 -0.707 -2.978 -4.409 -2.404 IR 5 5 3 5 5 3 28 89 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 1 73 g c - - MP 6 5 3 10 6 5 32 88 107 -9.364 -9.303 -0.018 -8.080 -8.360 -8.755 -3.831 -2.997 -3.795 0.617 -3.618 -4.452 0.854 -3.918 -3.870 2.837 -4.276 -0.713 1.871 -3.843 -1.175 -2.703 ML 7 5 3 10 6 3 26 86 106 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 3 25 86 106 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 21 84 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 3 27 87 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 3 27 87 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 72 C G - - MP 12 11 6 16 6 5 31 86 105 -9.364 -9.303 -0.018 -8.080 -8.360 -8.755 -4.097 -3.805 -3.998 0.021 -3.009 -4.646 3.103 -3.661 -3.977 1.529 -4.392 -1.585 0.835 -4.247 -0.625 -2.808 ML 13 11 6 16 6 2 25 84 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 2 25 84 104 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 21 82 101 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 3 27 85 105 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 3 27 85 105 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 71 c g - - MP 18 17 6 22 6 5 29 84 103 -9.364 -9.303 -0.018 -8.080 -8.360 -8.755 -3.141 -2.880 -3.222 0.733 -2.762 -4.023 2.237 -3.232 -3.242 1.678 -3.747 0.537 1.616 -3.340 -0.447 -2.158 ML 19 17 6 22 6 2 25 82 102 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 2 24 82 102 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 20 80 99 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 3 26 83 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 3 26 83 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 70 g c - - MP 24 23 6 28 6 5 28 82 101 -9.364 -9.303 -0.018 -8.080 -8.360 -8.755 -3.477 -2.737 -3.484 0.861 -3.437 -4.224 1.956 -3.685 -3.594 2.509 -4.028 0.683 0.624 -3.528 -1.017 -2.419 ML 25 23 6 28 6 2 24 80 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 2 24 80 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 20 78 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 3 25 81 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 3 25 81 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 5 69 g c - - MP 30 29 6 34 6 5 26 80 99 -9.364 -9.303 -0.018 -8.080 -8.360 -8.755 -2.565 0.048 -2.684 1.825 -2.755 -3.485 0.996 -3.019 -2.788 2.050 -3.293 -0.374 0.757 -2.774 0.549 -1.819 ML 31 29 6 34 6 2 23 78 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 2 23 78 98 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 19 76 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 2 24 79 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 3 24 79 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 6 68 c g - - MP 36 35 6 40 6 5 24 78 97 -9.364 -9.303 -0.018 -8.080 -8.360 -8.755 -3.250 -3.161 -3.321 0.517 -2.657 -4.117 2.088 -3.215 -3.310 1.474 -3.823 -1.143 2.088 -3.483 0.783 -2.234 ML 37 35 6 40 6 2 22 77 97 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 2 21 77 96 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 19 75 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 2 23 77 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 2 23 77 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 7 67 A U - - MP 42 41 6 46 4 4 22 76 95 -7.543 -7.750 -0.035 -6.164 -3.769 -3.134 -3.802 3.011 -3.544 -4.775 0.728 -3.793 -3.752 0.821 -4.250 -0.784 1.443 -4.133 -1.238 -2.690 ML 43 41 6 46 4 1 21 76 96 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 4 1 20 76 96 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 45 41 6 46 4 0 19 74 94 -4.568 -4.250 -2.265 -0.520 IL 46 46 5 46 4 2 22 77 97 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 47 47 6 47 3 2 21 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 8 - U - - - ML 48 47 6 50 3 2 20 73 93 -8.524 -0.014 -7.178 -2.549 -2.369 -3.320 1.822 D 49 47 6 50 3 0 18 72 92 -6.174 -1.687 -0.566 IL 50 50 3 50 3 2 20 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 9 - A - - - ML 51 50 3 53 2 1 19 72 92 -9.006 -0.003 1.048 -1.964 0.381 -1.421 D 52 50 3 53 2 0 18 71 91 -8.445 -0.004 IL 53 53 3 53 2 1 19 73 93 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 11 ] - - - - - - B 54 53 3 124 55 0 18 71 91 [ BEGR 42 ] - - - - - - S 55 54 1 56 3 0 0 36 55 -8.524 -0.014 -7.178 IL 56 56 2 56 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 45 - A - - - ML 57 56 2 59 3 1 1 36 55 -8.524 -0.014 -7.178 1.385 -1.618 -1.684 -0.412 D 58 56 2 59 3 0 0 35 54 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 46 - G - - - ML 60 59 3 62 3 1 1 35 54 -8.524 -0.014 -7.178 -2.700 -4.060 1.885 -3.430 D 61 59 3 62 3 0 0 34 53 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 47 - g - - - ML 63 62 3 65 3 1 1 34 52 -8.524 -0.481 -1.832 0.586 -2.024 0.919 -1.466 D 64 62 3 65 3 0 0 33 52 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 48 - U - - - ML 66 65 3 68 3 1 1 33 51 -8.062 -0.019 -6.716 -1.668 -1.633 -2.411 1.667 D 67 65 3 68 3 0 0 31 50 -8.417 -0.227 -2.808 IL 68 68 3 68 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 49 - C - - - ML 69 68 3 71 5 1 1 31 50 -7.593 -0.028 -7.408 -7.620 -8.512 -1.578 1.336 -2.466 -0.059 D 70 68 3 71 5 0 0 30 49 -4.959 -0.803 -4.221 -2.596 -2.508 IL 71 71 3 71 5 1 1 32 51 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 50 66 C G - - MP 72 71 3 76 6 2 2 30 49 -9.364 -9.303 -0.018 -8.080 -8.360 -8.755 -4.063 -3.835 -3.975 1.367 -2.984 -4.641 3.137 -3.636 -3.945 0.196 -4.368 -1.641 0.814 -4.253 -0.622 -2.801 ML 73 71 3 76 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 3 76 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 3 76 6 0 0 27 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 51 65 g c - - MP 78 77 6 82 6 2 2 28 47 -9.364 -9.303 -0.018 -8.080 -8.360 -8.755 -3.269 -3.002 -3.316 0.607 -2.825 -4.080 1.486 -3.318 -3.360 2.123 -3.845 -0.940 1.986 -3.442 0.799 -2.268 ML 79 77 6 82 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 52 64 g c - - MP 84 83 6 88 6 2 2 26 45 -9.364 -9.303 -0.018 -8.080 -8.360 -8.755 -3.573 -3.001 -3.543 0.634 -3.168 -4.231 1.794 -3.603 -3.657 2.626 -4.078 -0.813 0.766 -3.618 0.675 -2.477 ML 85 83 6 88 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 53 63 g c - - MP 90 89 6 94 6 2 2 24 43 -9.364 -9.303 -0.018 -8.080 -8.360 -8.755 -3.680 -2.656 -3.624 1.495 -4.000 -4.305 0.538 -4.011 -3.825 2.937 -4.200 -0.344 1.037 -3.597 -1.457 -2.574 ML 91 89 6 94 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 54 62 G C - - MP 96 95 6 100 4 2 2 22 41 -7.543 -7.750 -0.035 -6.164 -5.814 -3.622 -6.104 -0.561 -6.715 -5.090 -1.814 -6.360 -4.961 3.816 -5.237 -1.382 -2.178 -5.150 -3.925 -4.967 ML 97 95 6 100 4 1 1 24 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 99 95 6 100 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520 IL 100 100 5 100 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 101 101 6 101 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 55 - U - - - ML 102 101 6 104 3 1 1 20 38 -8.524 -0.014 -7.178 -2.549 -2.369 -3.320 1.822 D 103 101 6 104 3 0 0 19 38 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 56 - U - - - ML 105 104 3 107 3 1 1 18 37 -8.524 -0.014 -7.178 -2.549 -2.369 -3.320 1.822 D 106 104 3 107 3 0 0 18 37 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 57 - C - - - ML 108 107 3 110 3 1 1 17 36 -8.524 -0.014 -7.178 -3.081 1.849 -3.880 -2.250 D 109 107 3 110 3 0 0 17 35 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 58 - G - - - ML 111 110 3 113 3 1 1 16 34 -8.524 -0.014 -7.178 -0.198 -2.380 1.409 -1.835 D 112 110 3 113 3 0 0 16 34 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 59 - A - - - ML 114 113 3 116 3 1 1 14 33 -8.524 -0.014 -7.178 1.878 -3.490 -3.019 -3.147 D 115 113 3 116 3 0 0 15 33 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 60 - U - - - ML 117 116 3 119 3 1 1 13 31 -8.524 -0.014 -7.178 -1.468 -0.407 -2.235 1.418 D 118 116 3 119 3 0 0 13 32 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 61 - U - - - ML 120 119 3 122 2 1 1 1 1 * 0.000 -1.239 0.314 -2.046 1.064 D 121 119 3 122 2 0 0 0 0 * 0.000 IL 122 122 3 122 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 60 ] - - - - - - E 123 122 3 -1 0 0 0 0 0 [ BEGL 12 ] - - - - - - S 124 54 1 125 1 0 3 49 68 0.000 [ BIF 13 ] - - - - - - B 125 124 1 126 173 0 3 49 68 [ BEGL 14 ] - - - - - - S 126 125 1 127 4 0 0 30 48 -0.035 -7.164 -6.572 -7.212 [ MATP 15 ] 10 26 G C - - MP 127 126 1 131 6 2 2 30 48 -9.364 -9.303 -0.018 -8.080 -8.360 -8.755 -4.768 -3.151 -4.805 0.251 -5.796 -4.949 -0.981 -5.231 -4.514 3.516 -4.857 0.895 -1.246 -4.551 -3.005 -3.683 ML 128 126 1 131 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 129 126 1 131 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 130 126 1 131 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 131 131 5 131 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 132 132 6 132 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 11 25 c g - - MP 133 132 6 137 6 2 2 28 46 -9.364 -9.303 -0.018 -8.080 -8.360 -8.755 -4.380 -4.331 -4.172 -0.461 -2.935 -4.679 2.953 -3.697 -4.172 -0.278 -4.524 -2.247 2.367 -4.479 -0.580 -2.998 ML 134 132 6 137 6 1 1 27 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 135 132 6 137 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 136 132 6 137 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 137 137 5 137 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 138 138 6 138 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 12 24 g c - - MP 139 138 6 143 6 2 2 26 44 -9.364 -9.303 -0.018 -8.080 -8.360 -8.755 -3.838 -2.993 -3.801 0.619 -3.635 -4.454 0.839 -3.930 -3.877 2.852 -4.281 -0.708 1.851 -3.845 -1.190 -2.710 ML 140 138 6 143 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 141 138 6 143 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 142 138 6 143 6 0 0 24 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 143 143 5 143 6 1 1 26 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 144 144 6 144 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 13 23 c g - - MP 145 144 6 149 4 2 2 24 42 -7.543 -7.750 -0.035 -6.164 -3.454 -3.490 -3.467 0.042 -2.692 -4.152 2.807 -3.318 -3.483 0.166 -3.945 -1.653 0.946 -3.679 1.162 0.637 ML 146 144 6 149 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 147 144 6 149 4 1 1 24 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 148 144 6 149 4 0 0 23 42 -4.568 -4.250 -2.265 -0.520 IL 149 149 5 149 4 1 1 26 45 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 150 150 6 150 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 14 - A - - - ML 151 150 6 153 3 1 1 20 39 -8.524 -0.014 -7.178 1.878 -3.490 -3.019 -3.147 D 152 150 6 153 3 0 0 20 39 -6.174 -1.687 -0.566 IL 153 153 3 153 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 15 - g - - - ML 154 153 3 156 3 1 1 19 38 -8.524 -0.014 -7.178 0.586 -2.024 0.919 -1.466 D 155 153 3 156 3 0 0 19 37 -6.174 -1.687 -0.566 IL 156 156 3 156 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 16 - U - - - ML 157 156 3 159 3 1 1 18 36 -1.899 -0.464 -7.178 -1.468 -0.407 -2.235 1.418 D 158 156 3 159 3 0 0 16 35 -6.174 -1.687 -0.566 IL 159 159 3 159 3 1 1 18 36 -2.374 -0.363 -5.074 0.000 0.000 0.000 0.000 [ MATL 22 ] 18 - G - - - ML 160 159 3 162 3 1 1 16 34 -8.524 -0.014 -7.178 -2.700 -4.060 1.885 -3.430 D 161 159 3 162 3 0 0 16 35 -6.174 -1.687 -0.566 IL 162 162 3 162 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 19 - G - - - ML 163 162 3 165 3 1 1 14 33 -8.524 -0.014 -7.178 -2.700 -4.060 1.885 -3.430 D 164 162 3 165 3 0 0 15 33 -6.174 -1.687 -0.566 IL 165 165 3 165 3 1 1 19 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 20 - u - - - ML 166 165 3 168 3 1 1 11 23 -1.854 -0.481 -7.178 -0.664 -0.325 -0.613 0.939 D 167 165 3 168 3 0 0 9 20 -6.174 -1.687 -0.566 IL 168 168 3 168 3 1 1 11 22 -2.396 -0.357 -5.096 0.000 0.000 0.000 0.000 [ MATL 25 ] 22 - A - - - ML 169 168 3 171 2 1 1 1 1 * 0.000 1.878 -3.490 -3.019 -3.147 D 170 168 3 171 2 0 0 0 0 * 0.000 IL 171 171 3 171 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 26 ] - - - - - - E 172 171 3 -1 0 0 0 0 0 [ BEGR 27 ] - - - - - - S 173 125 1 174 3 0 0 32 50 -8.524 -0.014 -7.178 IL 174 174 2 174 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 27 - g - - - ML 175 174 2 177 5 1 1 31 50 -7.593 -0.028 -7.408 -7.620 -8.512 0.512 -2.047 0.983 -1.490 D 176 174 2 177 5 0 0 30 49 -4.959 -0.803 -4.221 -2.596 -2.508 IL 177 177 3 177 5 1 1 32 51 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 28 44 c g - - MP 178 177 3 182 6 2 2 30 49 -9.364 -9.303 -0.018 -8.080 -8.360 -8.755 -2.996 -2.785 -3.094 0.747 -2.684 -3.890 2.204 -3.144 -3.118 1.704 -3.626 0.455 1.175 -3.212 0.643 -2.072 ML 179 177 3 182 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 180 177 3 182 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 181 177 3 182 6 0 0 27 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 182 182 5 182 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 183 183 6 183 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 29 43 c g - - MP 184 183 6 188 6 2 2 28 47 -9.364 -9.303 -0.018 -8.080 -8.360 -8.755 -3.660 -3.462 -3.663 0.355 -2.818 -4.407 2.681 -3.427 -3.639 1.512 -4.115 -1.306 1.763 -3.844 -0.432 -2.489 ML 185 183 6 188 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 186 183 6 188 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 187 183 6 188 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 188 188 5 188 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 189 189 6 189 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 30 42 a u - - MP 190 189 6 194 6 2 2 26 45 -9.364 -9.303 -0.018 -8.080 -8.360 -8.755 -3.311 -3.146 -3.360 2.221 -2.772 -4.127 2.025 -3.303 -3.378 0.846 -3.868 -1.127 1.693 -3.528 -0.491 -2.313 ML 191 189 6 194 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 192 189 6 194 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 193 189 6 194 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 194 194 5 194 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 195 195 6 195 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 31 41 g c - - MP 196 195 6 200 6 2 2 24 43 -9.364 -9.303 -0.018 -8.080 -8.360 -8.755 -3.453 -2.737 -3.468 0.855 -3.398 -4.215 1.983 -3.656 -3.568 2.448 -4.006 0.791 0.648 -3.520 -0.989 -2.403 ML 197 195 6 200 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 198 195 6 200 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 199 195 6 200 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 200 200 5 200 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 201 201 6 201 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 32 40 c g - - MP 202 201 6 206 4 2 2 22 41 -7.543 -7.750 -0.035 -6.164 -3.332 -2.890 -3.380 1.837 -3.037 -4.188 2.208 -3.435 -3.424 1.867 -3.910 -0.719 0.913 -3.503 -0.696 -2.309 ML 203 201 6 206 4 1 1 24 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 204 201 6 206 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 205 201 6 206 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520 IL 206 206 5 206 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 207 207 6 207 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 33 - c - - - ML 208 207 6 210 3 1 1 20 38 -8.524 -0.014 -7.178 -1.256 0.893 -2.113 0.579 D 209 207 6 210 3 0 0 19 38 -6.174 -1.687 -0.566 IL 210 210 3 210 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 34 - U - - - ML 211 210 3 213 3 1 1 18 37 -8.524 -0.014 -7.178 -2.549 -2.369 -3.320 1.822 D 212 210 3 213 3 0 0 18 37 -6.174 -1.687 -0.566 IL 213 213 3 213 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 35 - g - - - ML 214 213 3 216 3 1 1 17 36 -8.524 -0.014 -7.178 -0.763 -1.427 0.837 0.325 D 215 213 3 216 3 0 0 17 35 -6.174 -1.687 -0.566 IL 216 216 3 216 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 36 - u - - - ML 217 216 3 219 3 1 1 16 34 -8.524 -0.014 -7.178 0.037 -0.330 -0.381 0.496 D 218 216 3 219 3 0 0 16 34 -6.174 -1.687 -0.566 IL 219 219 3 219 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 37 - c - - - ML 220 219 3 222 3 1 1 14 33 -8.524 -0.014 -7.178 0.403 0.783 -1.648 -0.649 D 221 219 3 222 3 0 0 15 33 -6.174 -1.687 -0.566 IL 222 222 3 222 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 38 - A - - - ML 223 222 3 225 3 1 1 13 31 -8.524 -0.014 -7.178 1.037 -1.963 0.397 -1.419 D 224 222 3 225 3 0 0 13 32 -6.174 -1.687 -0.566 IL 225 225 3 225 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 39 - a - - - ML 226 225 3 228 2 1 1 1 1 * 0.000 0.957 0.166 -1.522 -0.764 D 227 225 3 228 2 0 0 0 0 * 0.000 IL 228 228 3 228 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 41 ] - - - - - - E 229 228 3 -1 0 0 0 0 0 // HMMER3/f [i1.1.1 | July 2014] NAME tRNA5 LENG 72 MAXL 152 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jun 27 12:35:45 2016 COM [1] ./src/cmbuild tRNA5.cm tutorial/tRNA5.sto NSEQ 5 EFFN 4.575195 CKSUM 3535941971 STATS LOCAL MSV -8.3361 0.72958 STATS LOCAL VITERBI -9.7423 0.72958 STATS LOCAL FORWARD -2.8398 0.72958 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.54533 1.43782 1.21668 1.37396 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 0.00000 * 1 2.27104 2.21243 0.67362 1.28194 1 G - - ( 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 2 2.71979 0.53764 1.58904 1.92505 2 C - - ( 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 3 2.13247 1.12928 1.19870 1.36023 3 c - - ( 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 4 2.06386 1.33928 0.73468 2.02995 4 g - - ( 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 5 1.11916 2.01343 1.13651 1.51879 5 a - - ( 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 6 2.27600 1.26221 1.56184 0.90503 6 u - - ( 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 7 0.55854 2.34742 2.06069 1.58488 7 A - - ( 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 8 3.41131 3.24840 3.95063 0.09549 8 U - - , 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 9 0.62589 2.93067 1.09257 2.57049 9 A - - , 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 10 2.58478 3.48701 0.15236 3.34349 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 11 3.04360 0.66824 2.81745 0.96766 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 12 2.27167 2.22390 0.66329 1.29638 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 13 2.70763 0.72972 2.52177 0.99171 13 c - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 14 0.06447 4.06946 3.72356 3.85378 14 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 15 0.96309 2.96228 0.71023 2.58952 15 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 16 2.58013 1.68600 3.11568 0.36438 16 U - - _ 1.38629 1.38629 1.38629 1.38629 0.36284 1.23646 4.27667 0.09305 2.42079 1.09861 0.40547 17 3.50204 4.46790 0.06149 4.01568 18 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 18 3.50204 4.46790 0.06149 4.01568 19 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 19 1.92921 1.61736 1.81487 0.70632 20 u - - _ 1.38629 1.38629 1.38629 1.38629 0.37560 1.20654 4.27667 0.09038 2.44862 1.09861 0.40547 20 0.06447 4.06946 3.72356 3.85378 22 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 21 2.10278 2.68978 0.46988 1.68787 23 G - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 22 1.38592 0.72007 2.05285 2.00384 24 c - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 23 1.05742 2.98038 0.61496 2.79344 25 G - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 24 3.52889 0.29960 3.29055 1.64863 26 C - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 25 1.01810 2.97712 0.66580 2.60482 27 G - - , 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 26 2.11085 1.15042 1.18985 1.35443 28 c - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 27 2.42824 0.83921 1.56647 1.30573 29 c - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 28 1.09889 1.29935 2.02826 1.33756 30 a - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 29 2.06898 1.31812 0.74979 2.01303 31 g - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 30 1.36950 1.15928 1.31013 1.81850 32 c - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 31 2.40938 0.72219 3.02139 0.97894 33 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 32 3.41131 3.24840 3.95063 0.09549 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 33 2.03026 2.49922 0.75131 1.15581 35 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 34 1.37091 1.61913 1.64530 1.03536 36 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 35 1.09596 0.79030 2.66885 1.94670 37 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 36 0.63350 2.92991 1.08102 2.56892 38 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 37 0.68448 1.23998 2.57183 2.04128 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 38 2.05098 1.42195 1.06925 1.24869 40 g - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 39 2.25157 1.00742 1.23141 1.43664 41 c - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 40 1.49091 2.19537 1.18474 1.02809 42 u - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 41 1.46309 1.66242 0.76188 2.18914 43 g - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 42 1.84429 1.51321 0.88732 1.56112 44 g - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 43 0.38710 2.63412 2.69028 1.70743 45 A - - , 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 44 3.50204 4.46790 0.06149 4.01568 46 G - - , 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 45 0.96309 2.96228 0.71023 2.58952 47 g - - , 1.38629 1.38629 1.38629 1.38629 0.37560 4.27667 1.20654 1.46634 0.26236 1.09861 0.40547 46 2.76487 2.70273 3.28806 0.18312 48 U - - , 1.38629 1.38629 1.38629 1.38629 0.03964 3.94071 3.94071 1.46634 0.26236 0.08877 2.46575 47 2.65665 0.41541 3.29031 1.45884 49 C - - , 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 48 1.72807 0.51473 2.49712 1.94920 50 C - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 49 2.23405 1.71156 1.13675 0.93787 51 u - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 50 2.24174 1.47214 0.80734 1.52210 52 g - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 51 1.62002 2.40165 0.60094 1.81254 53 G - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 52 3.13623 4.03650 0.08313 3.98115 54 G - - < 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 53 3.41131 3.24840 3.95063 0.09549 55 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 54 3.41131 3.24840 3.95063 0.09549 56 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 55 3.81775 0.07857 4.34279 3.20425 57 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 56 1.55092 3.20619 0.37228 2.84263 58 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 57 0.06447 4.06946 3.72356 3.85378 59 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 58 2.58013 1.68600 3.11568 0.36438 60 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 59 2.39994 1.14144 2.97016 0.61874 61 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 60 4.11656 0.10126 3.89068 2.82057 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 61 1.95700 0.67131 2.21870 1.43159 63 C - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 62 2.18076 0.86710 1.10730 1.99196 64 c - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 63 1.27825 1.21396 1.24116 1.99945 65 c - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 64 2.19639 2.68263 0.47103 1.62938 66 G - - > 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 65 1.68678 2.30864 2.17351 0.50798 67 U - - ) 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 66 1.21618 1.66846 0.95030 2.05201 68 g - - ) 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 67 2.09329 1.05549 1.48837 1.19416 69 c - - ) 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 68 2.26917 0.96322 1.25225 1.47369 70 c - - ) 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 69 1.53154 1.55221 1.02428 1.54664 71 g - - ) 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 70 2.18028 1.66521 0.48878 2.47139 72 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 71 1.37162 0.72882 2.04389 2.00766 73 c - - ) 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 72 1.04988 2.29119 1.14633 1.46503 74 a - - : 1.38629 1.38629 1.38629 1.38629 0.01418 4.26268 * 1.46634 0.26236 0.00000 * //