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comparison lighter.xml @ 2:b4d3d0643b0a draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/lighter commit d52414cda24443e19c511251e0fac4d49d97f914
author bgruening
date Tue, 12 Mar 2024 11:21:16 +0000
parents b0cfd92907eb
children
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1:b0cfd92907eb 2:b4d3d0643b0a
1 <tool id="lighter" name="lighter" version="1.0" profile="16.04"> 1 <tool id="lighter" name="lighter" version="1.0" profile="16.04">
2 <description>can correct the reads containing sequence errors</description> 2 <description>can correct the reads containing sequence errors</description>
3 <xrefs>
4 <xref type="bio.tools">lighter</xref>
5 </xrefs>
3 <requirements> 6 <requirements>
4 <requirement type="package" version="1.1.1">lighter</requirement> 7 <requirement type="package" version="1.1.1">lighter</requirement>
5 </requirements> 8 </requirements>
6 <command><![CDATA[ 9 <command><![CDATA[
7 lighter 10 lighter
27 $stable 30 $stable
28 > $outfile 31 > $outfile
29 ]]> 32 ]]>
30 </command> 33 </command>
31 <inputs> 34 <inputs>
32 <param argument="-r" multiple="True" type="data" label="Input file"/> 35 <param argument="-r" multiple="True" type="data" format="fasta,fastq,fasta.gz,fastq.gz" label="Input file"/>
33 <conditional name="kmer"> 36 <conditional name="kmer">
34 <param name="k_select" type="select" label="Do you want k or K?"> 37 <param name="k_select" type="select" label="Do you want k or K?">
35 <option value="smallk">small k</option> 38 <option value="smallk">small k</option>
36 <option value="bigK">big K</option> 39 <option value="bigK">big K</option>
37 </param> 40 </param>