Mercurial > repos > bgruening > nanopolish_methylation

annotate test-data/30xpolyA-small-subset-sequencing_summary.txt @ 5:12efe2f03697 draft

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"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/nanopolish commit dff183f4eb2d3df42917ec4fed0fbdb2ea11e19a"
author bgruening
date Fri, 29 May 2020 13:30:11 -0400
parents 02e3c674d917
children
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02e3c674d917 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/nanopolish commit 89078a214cefd31d28da75ddebb21f546fba79df-dirty
bgruening
parents:
diff changeset
1 filename read_id run_id channel start_time duration num_events passes_filtering template_start num_events_template template_duration num_called_template sequence_length_template mean_qscore_template strand_score_template calibration_strand_genome_template calibration_strand_identity_template calibration_strand_accuracy_template calibration_strand_speed_bps_template
02e3c674d917 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/nanopolish commit 89078a214cefd31d28da75ddebb21f546fba79df-dirty
bgruening
parents:
diff changeset
2 MINICOL596_20180206_FAH55913_MN19174_sequencing_throughput_LS_RNA_21456_30xpolyA_11237_read_1111_ch_186_strand.fast5 a3237e11-476a-498e-beee-e79ef5c2f4ca 0c640f6d456ec16c9dfc0e1a607256f68c2b0c2f 186 4706.06607 6.69256 1317 True 0.1328 1317 6.55976 1317 458 9.089 -0.0007 filtered_out -1.0 -1.0 0.0
02e3c674d917 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/nanopolish commit 89078a214cefd31d28da75ddebb21f546fba79df-dirty
bgruening
parents:
diff changeset
3 MINICOL596_20180206_FAH55913_MN19174_sequencing_throughput_LS_RNA_21456_30xpolyA_11237_read_1111_ch_114_strand.fast5 4d5344d1-618d-4116-9955-58937325ab81 0c640f6d456ec16c9dfc0e1a607256f68c2b0c2f 114 5212.87815 16.99203 3123 True 1.43592 3123 15.55611 3123 1339 9.793 -0.0002 YHR174W 0.9687249660491943 0.900820255279541 0.0
02e3c674d917 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/nanopolish commit 89078a214cefd31d28da75ddebb21f546fba79df-dirty
bgruening
parents:
diff changeset
4 MINICOL596_20180206_FAH55913_MN19174_sequencing_throughput_LS_RNA_21456_30xpolyA_11237_read_1111_ch_117_strand.fast5 ed326f39-888c-4def-9336-5ea9998f8ff8 0c640f6d456ec16c9dfc0e1a607256f68c2b0c2f 117 4600.60259 16.66335 3319 True 0.1328 3319 16.53054 3319 1376 9.102 -0.0002 YHR174W 0.9599359035491943 0.8940298557281494 0.0
02e3c674d917 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/nanopolish commit 89078a214cefd31d28da75ddebb21f546fba79df-dirty
bgruening
parents:
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5 MINICOL596_20180206_FAH55913_MN19174_sequencing_throughput_LS_RNA_21456_30xpolyA_11237_read_1111_ch_398_strand.fast5 b9566e59-7f55-430b-a650-50e4e25efd8f 0c640f6d456ec16c9dfc0e1a607256f68c2b0c2f 398 4906.15405 19.28918 3142 True 3.63977 3142 15.6494 3142 1316 9.558 -0.0003 YHR174W 0.972016453742981 0.874167263507843 0.0
02e3c674d917 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/nanopolish commit 89078a214cefd31d28da75ddebb21f546fba79df-dirty
bgruening
parents:
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6 MINICOL596_20180206_FAH55913_MN19174_sequencing_throughput_LS_RNA_21456_30xpolyA_11237_read_1111_ch_178_strand.fast5 0681af58-5bc3-49b1-a7df-899a5fb96608 0c640f6d456ec16c9dfc0e1a607256f68c2b0c2f 178 4751.95153 18.94721 3518 True 1.42331 3518 17.5239 3518 1345 9.458 -0.0004 YHR174W 0.9727782011032104 0.9060402512550354 0.0
02e3c674d917 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/nanopolish commit 89078a214cefd31d28da75ddebb21f546fba79df-dirty
bgruening
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7 MINICOL596_20180206_FAH55913_MN19174_sequencing_throughput_LS_RNA_21456_30xpolyA_11237_read_1111_ch_470_strand.fast5 56f62749-403c-454d-930b-83d9057ce93f 0c640f6d456ec16c9dfc0e1a607256f68c2b0c2f 470 4876.32371 12.34097 1820 True 3.27556 1820 9.06541 1820 693 9.147 -0.0009 filtered_out -1.0 -1.0 0.0
02e3c674d917 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/nanopolish commit 89078a214cefd31d28da75ddebb21f546fba79df-dirty
bgruening
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8 MINICOL596_20180206_FAH55913_MN19174_sequencing_throughput_LS_RNA_21456_30xpolyA_11237_read_1111_ch_124_strand.fast5 9fb6716f-89a8-4995-9c11-8206052e21aa 0c640f6d456ec16c9dfc0e1a607256f68c2b0c2f 124 5102.39708 21.16202 3491 True 3.77656 3491 17.38546 3491 1317 9.076 -0.0002 YHR174W 0.9644300937652588 0.8990203738212585 0.0
02e3c674d917 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/nanopolish commit 89078a214cefd31d28da75ddebb21f546fba79df-dirty
bgruening
parents:
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9 MINICOL596_20180206_FAH55913_MN19174_sequencing_throughput_LS_RNA_21456_30xpolyA_11237_read_1111_ch_185_strand.fast5 ad1abf81-31b4-4d68-8805-39bc5dd2854c 0c640f6d456ec16c9dfc0e1a607256f68c2b0c2f 185 4035.69256 18.64608 3134 True 3.03818 3134 15.6079 3134 1347 8.833 -0.0004 YHR174W 0.9604200124740601 0.869787871837616 0.0
02e3c674d917 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/nanopolish commit 89078a214cefd31d28da75ddebb21f546fba79df-dirty
bgruening
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10 MINICOL596_20180206_FAH55913_MN19174_sequencing_throughput_LS_RNA_21456_30xpolyA_11237_read_1111_ch_481_strand.fast5 adc50c94-789e-4c49-b20d-1f1598a27bec 0c640f6d456ec16c9dfc0e1a607256f68c2b0c2f 481 5763.81906 14.04117 2061 True 3.77722 2061 10.26394 2061 880 9.785 -0.0006 filtered_out -1.0 -1.0 0.0
02e3c674d917 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/nanopolish commit 89078a214cefd31d28da75ddebb21f546fba79df-dirty
bgruening
parents:
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11 MINICOL596_20180206_FAH55913_MN19174_sequencing_throughput_LS_RNA_21456_30xpolyA_11237_read_1111_ch_5_strand.fast5 92f23fd6-df21-40a3-8089-971ab76d1928 0c640f6d456ec16c9dfc0e1a607256f68c2b0c2f 5 5409.94754 17.43991 3133 True 1.83466 3133 15.60525 3133 1312 8.486 -0.0004 YHR174W 0.950647234916687 0.8781763911247253 0.0
02e3c674d917 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/nanopolish commit 89078a214cefd31d28da75ddebb21f546fba79df-dirty
bgruening
parents:
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12 MINICOL596_20180206_FAH55913_MN19174_sequencing_throughput_LS_RNA_21456_30xpolyA_11237_read_1111_ch_70_strand.fast5 abb19cf7-f443-4d7a-9267-60cbcc63c1ea 0c640f6d456ec16c9dfc0e1a607256f68c2b0c2f 70 5222.23705 17.76726 3285 True 1.40438 3285 16.36288 3285 1343 9.19 -0.0006 YHR174W 0.9666136503219604 0.8987435102462769 0.0
02e3c674d917 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/nanopolish commit 89078a214cefd31d28da75ddebb21f546fba79df-dirty
bgruening
parents:
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13 MINICOL596_20180206_FAH55913_MN19174_sequencing_throughput_LS_RNA_21456_30xpolyA_11237_read_1111_ch_83_strand.fast5 25f527d1-40ac-4f1e-9e9a-51c19ebe469e 0c640f6d456ec16c9dfc0e1a607256f68c2b0c2f 83 4816.32869 17.37616 3189 True 1.4917 3189 15.88446 3189 1324 8.695 -0.0002 YHR174W 0.9548022747039795 0.8769459128379822 0.0
02e3c674d917 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/nanopolish commit 89078a214cefd31d28da75ddebb21f546fba79df-dirty
bgruening
parents:
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14 MINICOL596_20180206_FAH55913_MN19174_sequencing_throughput_LS_RNA_21456_30xpolyA_11237_read_1111_ch_469_strand.fast5 5247b83c-27db-483f-a2bb-4b2a27b97488 0c640f6d456ec16c9dfc0e1a607256f68c2b0c2f 469 5135.93293 33.82802 6747 True 0.22709 6747 33.60093 6747 1385 9.436 -0.0001 YHR174W 0.9835293889045715 0.9275147914886475 0.0