Mercurial > repos > bgruening > openbabel_addh
comparison test-data/ob_prepare_ligands.sdf @ 8:883fe4f7f1b2 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/chemicaltoolbox/openbabel commit 72df8ae9b8fd9910b3d24aa0836b9b3c9d43f4fb
author | bgruening |
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date | Fri, 10 May 2019 08:53:02 -0400 |
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7:d2e6d682bcd0 | 8:883fe4f7f1b2 |
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1 | |
2 SciTegic01171120562D | |
3 | |
4 26 30 0 0 0 0 999 V2000 | |
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61 M END | |
62 > <mr_id> | |
63 4358263 | |
64 | |
65 > <SMI> | |
66 Oc1cccc(c1)c2nc(N3CCOCC3)c4oc5ncccc5c4n2 | |
67 | |
68 $$$$ | |
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167 M END | |
168 > <mr_id> | |
169 8573 | |
170 | |
171 > <SMI> | |
172 CO[C@@H]1[C@@H](C[C@H]2O[C@]1(C)n3c4ccccc4c5c6CNC(=O)c6c7c8ccccc8n2c7c35)N(C)C(=O)c9ccccc9 | |
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232 M END | |
233 > <mr_id> | |
234 4027 | |
235 | |
236 > <SMI> | |
237 Clc1ccc(Nc2nnc(Cc3ccncc3)c4ccccc24)cc1 | |
238 | |
239 $$$$ | |
240 | |
241 SciTegic01171120562D | |
242 | |
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298 M END | |
299 > <mr_id> | |
300 600 | |
301 | |
302 > <SMI> | |
303 CC[C@H](CO)Nc1nc(NCc2ccccc2)c3ncn(C(C)C)c3n1 | |
304 | |
305 $$$$ | |
306 | |
307 SciTegic01171120562D | |
308 | |
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362 19 25 2 0 | |
363 M END | |
364 > <mr_id> | |
365 8393 | |
366 | |
367 > <SMI> | |
368 Oc1ccc(cc1)c2nc(c([nH]2)c3ccncc3)c4ccc(F)cc4 | |
369 | |
370 $$$$ | |
371 | |
372 SciTegic01171120562D | |
373 | |
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430 26 27 1 0 | |
431 21 27 2 0 | |
432 M END | |
433 > <mr_id> | |
434 3250 | |
435 | |
436 > <SMI> | |
437 CS(=O)c1ccc(cc1)c2nc(c([nH]2)c3ccncc3)c4ccc(F)cc4 | |
438 | |
439 $$$$ | |
440 | |
441 SciTegic01171120562D | |
442 | |
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505 21 29 2 0 | |
506 M END | |
507 > <mr_id> | |
508 4347423 | |
509 | |
510 > <SMI> | |
511 NC(=O)c1ccc(cc1)c2nc(c([nH]2)c3ccccn3)c4ccc5OCOc5c4 | |
512 | |
513 $$$$ | |
514 | |
515 SciTegic01171120562D | |
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579 9 29 2 0 | |
580 7 30 1 0 | |
581 30 31 2 0 | |
582 31 32 1 0 | |
583 5 32 2 0 | |
584 M END | |
585 > <mr_id> | |
586 4255941 | |
587 | |
588 > <SMI> | |
589 CNC(=O)c1cc(Oc2ccc(NC(=O)Nc3ccc(Cl)c(c3)C(F)(F)F)cc2)ccn1 | |
590 | |
591 $$$$ | |
592 | |
593 SciTegic01171120562D | |
594 | |
595 35 42 0 0 1 0 999 V2000 | |
596 -1.9455 5.8387 0.0000 C 0 0 | |
597 -2.5513 4.8029 0.0000 N 0 0 | |
598 -1.8100 3.5000 0.0000 C 0 0 2 0 0 0 | |
599 -0.2400 3.5200 0.0000 C 0 0 | |
600 0.5000 2.1800 0.0000 C 0 0 1 0 0 0 | |
601 -1.0600 2.1800 0.0000 O 0 0 | |
602 -1.8300 0.9300 0.0000 C 0 0 1 0 0 0 | |
603 -3.0300 0.9300 0.0000 C 0 0 | |
604 -2.6500 2.2500 0.0000 C 0 0 2 0 0 0 | |
605 -4.1471 2.2892 0.0000 O 0 0 | |
606 -4.7748 1.2665 0.0000 C 0 0 | |
607 -0.9800 -0.7800 0.0000 N 0 0 | |
608 -2.1300 -1.4600 0.0000 C 0 0 | |
609 -3.3200 -0.7600 0.0000 C 0 0 | |
610 -4.5500 -1.4800 0.0000 C 0 0 | |
611 -4.5800 -2.7700 0.0000 C 0 0 | |
612 -3.3400 -3.4700 0.0000 C 0 0 | |
613 -2.1300 -2.7900 0.0000 C 0 0 | |
614 0.2400 -2.7700 0.0000 C 0 0 | |
615 1.4300 -3.4700 0.0000 C 0 0 | |
616 1.7600 -4.9700 0.0000 C 0 0 | |
617 3.2600 -5.0800 0.0000 N 0 0 | |
618 3.8500 -3.6300 0.0000 C 0 0 | |
619 4.9971 -3.2777 0.0000 O 0 0 | |
620 2.6600 -2.7500 0.0000 C 0 0 | |
621 2.6800 -1.4600 0.0000 C 0 0 | |
622 3.7900 0.5600 0.0000 C 0 0 | |
623 4.9600 1.2800 0.0000 C 0 0 | |
624 4.9600 2.6300 0.0000 C 0 0 | |
625 3.8100 3.2900 0.0000 C 0 0 | |
626 2.6400 2.5900 0.0000 C 0 0 | |
627 2.6400 1.2400 0.0000 C 0 0 | |
628 1.4900 0.5400 0.0000 N 0 0 | |
629 1.4500 -0.7600 0.0000 C 0 0 | |
630 0.2400 -1.4400 0.0000 C 0 0 | |
631 1 2 1 0 | |
632 3 2 1 6 | |
633 3 4 1 0 | |
634 5 4 1 6 | |
635 5 6 1 0 | |
636 6 7 1 0 | |
637 7 8 1 1 | |
638 7 9 1 0 | |
639 3 9 1 0 | |
640 9 10 1 6 | |
641 10 11 1 0 | |
642 7 12 1 0 | |
643 12 13 1 0 | |
644 13 14 1 0 | |
645 14 15 2 0 | |
646 15 16 1 0 | |
647 16 17 2 0 | |
648 17 18 1 0 | |
649 13 18 2 0 | |
650 18 19 1 0 | |
651 19 20 1 0 | |
652 20 21 1 0 | |
653 21 22 1 0 | |
654 22 23 1 0 | |
655 23 24 2 0 | |
656 23 25 1 0 | |
657 20 25 2 0 | |
658 25 26 1 0 | |
659 26 27 1 0 | |
660 27 28 1 0 | |
661 28 29 2 0 | |
662 29 30 1 0 | |
663 30 31 2 0 | |
664 31 32 1 0 | |
665 27 32 2 0 | |
666 32 33 1 0 | |
667 5 33 1 0 | |
668 33 34 1 0 | |
669 26 34 2 0 | |
670 34 35 1 0 | |
671 12 35 1 0 | |
672 19 35 2 0 | |
673 M END | |
674 > <mr_id> | |
675 66 | |
676 | |
677 > <SMI> | |
678 CN[C@@H]1C[C@H]2O[C@@](C)([C@@H]1OC)n3c4ccccc4c5c6CNC(=O)c6c7c8ccccc8n2c7c35 | |
679 | |
680 $$$$ | |
681 | |
682 SciTegic01171120562D | |
683 | |
684 32 35 0 0 1 0 999 V2000 | |
685 7.1381 -2.1568 0.0000 C 0 0 | |
686 6.0456 -2.6531 0.0000 C 0 0 | |
687 4.7409 -1.9129 0.0000 N 0 0 | |
688 3.6552 -2.9294 0.0000 C 0 0 | |
689 2.1855 -2.6254 0.0000 C 0 0 | |
690 1.7138 -1.2033 0.0000 C 0 0 | |
691 2.5889 0.0182 0.0000 C 0 0 | |
692 3.7889 0.0269 0.0000 O 0 0 | |
693 1.7138 1.2033 0.0000 N 0 0 | |
694 0.2917 0.7475 0.0000 C 0 0 | |
695 -1.0028 1.5132 0.0000 C 0 0 | |
696 -2.3155 0.7475 0.0000 C 0 0 | |
697 -2.3155 -0.7475 0.0000 C 0 0 | |
698 -3.3560 -1.3452 0.0000 F 0 0 | |
699 -1.0028 -1.5132 0.0000 C 0 0 | |
700 0.2917 -0.7475 0.0000 C 0 0 | |
701 4.2542 -4.2907 0.0000 C 0 0 | |
702 3.6559 -5.3308 0.0000 C 0 0 | |
703 5.7448 -4.1226 0.0000 C 0 0 | |
704 6.7580 -5.2264 0.0000 C 0 0 | |
705 6.3978 -6.3710 0.0000 O 0 0 | |
706 8.2231 -4.9012 0.0000 N 0 0 | |
707 9.2380 -6.0068 0.0000 C 0 0 | |
708 10.7032 -5.6816 0.0000 C 0 0 2 0 0 0 | |
709 11.0634 -4.5369 0.0000 O 0 0 | |
710 11.7181 -6.7872 0.0000 C 0 0 | |
711 13.1833 -6.4620 0.0000 N 0 0 | |
712 14.1993 -7.5656 0.0000 C 0 0 | |
713 15.6630 -7.2376 0.0000 C 0 0 | |
714 16.1108 -5.8060 0.0000 O 0 0 | |
715 15.0949 -4.7024 0.0000 C 0 0 | |
716 13.6312 -5.0304 0.0000 C 0 0 | |
717 1 2 1 0 | |
718 2 3 1 0 | |
719 3 4 1 0 | |
720 4 5 1 0 | |
721 5 6 2 0 | |
722 6 7 1 0 | |
723 7 8 2 0 | |
724 7 9 1 0 | |
725 9 10 1 0 | |
726 10 11 1 0 | |
727 11 12 2 0 | |
728 12 13 1 0 | |
729 13 14 1 0 | |
730 13 15 2 0 | |
731 15 16 1 0 | |
732 6 16 1 0 | |
733 10 16 2 0 | |
734 4 17 2 0 | |
735 17 18 1 0 | |
736 17 19 1 0 | |
737 2 19 2 0 | |
738 19 20 1 0 | |
739 20 21 2 0 | |
740 20 22 1 0 | |
741 22 23 1 0 | |
742 23 24 1 0 | |
743 24 25 1 6 | |
744 24 26 1 0 | |
745 26 27 1 0 | |
746 27 28 1 0 | |
747 28 29 1 0 | |
748 29 30 1 0 | |
749 30 31 1 0 | |
750 31 32 1 0 | |
751 27 32 1 0 | |
752 M END | |
753 > <mr_id> | |
754 4362206 | |
755 | |
756 > <SMI> | |
757 Cc1[nH]c(/C=C/2\C(=O)Nc3ccc(F)cc23)c(C)c1C(=O)NC[C@H](O)CN4CCOCC4 | |
758 | |
759 $$$$ |