Mercurial > repos > bgruening > openbabel_remove_protonation_state

diff cheminfolib.py @ 12:bf4e668b6690 draft

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"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/chemicaltoolbox/openbabel commit 944ea4bb8a9cd4244152a4a4fecd0485fabc2ad0"
author bgruening
date Tue, 28 Jul 2020 08:41:46 -0400
parents 0eabdfaef1d1
children b578d0c101cd
line wrap: on
line diff
--- a/cheminfolib.py	Thu Apr 09 10:11:55 2020 -0400
+++ b/cheminfolib.py	Tue Jul 28 08:41:46 2020 -0400
@@ -13,8 +13,8 @@
     print('psycopg2 is not available. It is currently used in the pgchem wrappers, that are not shipped with default CTB')
 
 try:
-    import pybel
-    import openbabel
+    from openbabel import openbabel, pybel
+    openbabel.obErrorLog.StopLogging()
 except:
     print('OpenBabel could not be found. A few functions are not available without OpenBabel.')