Mercurial > repos > bgruening > pileometh

diff tool_dependencies.xml @ 0:65575e70af7e draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 033c712216994524fdd120b771052ac4ca9e51c0-dirty
author bgruening
date Fri, 18 Sep 2015 11:39:55 -0400
parents
children d1b66015effd
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Fri Sep 18 11:39:55 2015 -0400
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+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="pileometh" version="0.1.5">
+        <install version="1.0">
+            <actions>
+                <action target_filename="PileOMeth-0.1.5.tar.gz" type="download_by_url">https://github.com/dpryan79/PileOMeth/archive/0.1.5.tar.gz</action>
+                <action type="shell_command">make</action>
+                <action type="shell_command">make install prefix=$INSTALL_DIR</action>
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
+                    <environment_variable name="PILEOMETH_ROOT_PATH" action="set_to">$INSTALL_DIR</environment_variable>
+                </action>
+            </actions>
+        </install>
+            <readme>
+        <![CDATA[
+            PileOMeth: A tool for processing bisulfite sequencing alignments.
+            See https://github.com/dpryan79/PileOMeth/
+        ]]>
+        </readme>
+    </package>
+</tool_dependency>