Mercurial > repos > bgruening > plotly_parallel_coordinates_plot

comparison paracords_plot.xml @ 1:7b21a9b5922f draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/plotly_parallel_coordinates_plot commit 7ba5d8f0e920dccbc82588e4f4a7b9039dc3ea36
author bgruening
date Wed, 10 Oct 2018 02:29:28 -0400
parents 7b2455348edf
children 9958188c6195
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0:7b2455348edf 1:7b21a9b5922f
8 <version_command>echo $version</version_command> 8 <version_command>echo $version</version_command>
9 <command detect_errors="aggressive"><![CDATA[ 9 <command detect_errors="aggressive"><![CDATA[
10 python '$__tool_directory__/paracords_plot.py' 10 python '$__tool_directory__/paracords_plot.py'
11 -i '$infile' 11 -i '$infile'
12 -d '$col_dimensions' 12 -d '$col_dimensions'
13 -t '$categorized_datatype'
13 -c '$col_color' 14 -c '$col_color'
14 ]]> 15 ]]>
15 </command> 16 </command>
16 <inputs> 17 <inputs>
17 <param name="infile" type="data" format="tabular" label="Select data file :"/> 18 <param name="infile" type="data" format="tabular" label="Select data file :"/>
18 <param name="col_dimensions" multiple="true" type="data_column" data_ref="infile" use_header_names="true" display="checkboxes" label="Select the columns for dimentions:"/> 19 <param name="col_dimensions" multiple="true" type="data_column" data_ref="infile" use_header_names="true" display="checkboxes" label="Select the columns for dimentions:"/>
20 <param name="categorized_datatype" type="boolean" optional="true" truevalue="booltrue" falsevalue="boolfalse" checked="true" label="All the dimensions in categorized datatype:"/>
19 <param name="col_color" type="data_column" data_ref="infile" use_header_names="true" label="Select a column containg the values for coloring:" help="e.g. mean_test_score"/> 21 <param name="col_color" type="data_column" data_ref="infile" use_header_names="true" label="Select a column containg the values for coloring:" help="e.g. mean_test_score"/>
20 </inputs> 22 </inputs>
21 23
22 <outputs> 24 <outputs>
23 <data name="output" format="html" from_work_dir="output.html" label="Plot visualization of tabular data on ${on_string}"/> 25 <data name="output" format="html" from_work_dir="output.html" label="Plot visualization of tabular data on ${on_string}"/>
24 </outputs> 26 </outputs>
25 <tests> 27 <tests>
26 <test> 28 <test>
27 <param name="infile" value="parcoords01.tabular" ftype="tabular"/> 29 <param name="infile" value="parcoords01.tabular" ftype="tabular"/>
28 <param name="col_dimensions" value="4,5"/> 30 <param name="col_dimensions" value="4,5"/>
31 <param name="categorized_datatype" value="false"/>
29 <param name="col_color" value="3"/> 32 <param name="col_color" value="3"/>
30 <output name="output" file="parcoords_plot01.html" compare="sim_size"/> 33 <output name="output" file="parcoords_plot01.html" compare="sim_size"/>
31 </test> 34 </test>
32 <test> 35 <test>
33 <param name="infile" value="parcoords02.tabular" ftype="tabular"/> 36 <param name="infile" value="parcoords02.tabular" ftype="tabular"/>
34 <param name="col_dimensions" value="4,5"/> 37 <param name="col_dimensions" value="4,5"/>
38 <param name="categorized_datatype" value="false"/>
35 <param name="col_color" value="3"/> 39 <param name="col_color" value="3"/>
36 <output name="output" file="parcoords_plot02.html" compare="sim_size"/> 40 <output name="output" file="parcoords_plot02.html" compare="sim_size"/>
37 </test> 41 </test>
38 </tests> 42 </tests>
39 <help><![CDATA[ 43 <help><![CDATA[