Mercurial > repos > bgruening > repeat_masker

annotate test-data/README.md @ 15:ba6d2c32f797 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/repeatmasker commit 7a5f368a5859e659aa36d0358bb96ca12574e2cc
author iuc
date Mon, 24 Apr 2023 10:41:00 +0000
parents 7563ea7a922d
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7563ea7a922d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/repeatmasker commit 7a5f368a5859e659aa36d0358bb96ca12574e2cc
iuc
parents: 10
diff changeset
1 Dfam_partial_test.h5 was generated from the test dataset in https://github.com/Dfam-consortium/FamDB/ (commit: 20c436d)
7563ea7a922d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/repeatmasker commit 7a5f368a5859e659aa36d0358bb96ca12574e2cc
iuc
parents: 10
diff changeset
2
7563ea7a922d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/repeatmasker commit 7a5f368a5859e659aa36d0358bb96ca12574e2cc
iuc
parents: 10
diff changeset
3 `./export_dfam.py --from-tax-dump /path/to/taxonomy_dump/from_ncbi/ --from-hmm test_data/Dfam_partial.hmm --db-version 1.0 Dfam_partial_test.h5`
7563ea7a922d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/repeatmasker commit 7a5f368a5859e659aa36d0358bb96ca12574e2cc
iuc
parents: 10
diff changeset
4