Mercurial > repos > bgruening > repeat_masker

comparison test-data/small_dfam_up.fasta.stats @ 14:7563ea7a922d draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/repeatmasker commit 7a5f368a5859e659aa36d0358bb96ca12574e2cc
author iuc
date Mon, 24 Apr 2023 10:29:31 +0000
parents 72aade318318
children
comparison
equal deleted inserted replaced
13:3f987772e283 14:7563ea7a922d
11 SINEs: 0 0 bp 0.00 % 11 SINEs: 0 0 bp 0.00 %
12 Alu/B1 0 0 bp 0.00 % 12 Alu/B1 0 0 bp 0.00 %
13 B2-B4 0 0 bp 0.00 % 13 B2-B4 0 0 bp 0.00 %
14 IDs 0 0 bp 0.00 % 14 IDs 0 0 bp 0.00 %
15 MIRs 0 0 bp 0.00 % 15 MIRs 0 0 bp 0.00 %
16
16 17
17 LINEs: 0 0 bp 0.00 % 18 LINEs: 0 0 bp 0.00 %
18 LINE1 0 0 bp 0.00 % 19 LINE1 0 0 bp 0.00 %
19 LINE2 0 0 bp 0.00 % 20 LINE2 0 0 bp 0.00 %
20 L3/CR1 0 0 bp 0.00 % 21 L3/CR1 0 0 bp 0.00 %
45 have been counted as one element 46 have been counted as one element
46 Runs of >=20 X/Ns in query were excluded in % calcs 47 Runs of >=20 X/Ns in query were excluded in % calcs
47 48
48 49
49 The query species was assumed to be rodent 50 The query species was assumed to be rodent
50 RepeatMasker version 4.1.2-p1 , default mode 51 RepeatMasker version 4.1.5 , default mode
51 52
52 run with rmblastn version 2.10.0+ 53 run with rmblastn version 2.13.0+
53 FamDB: CONS-_ 54 FamDB: CONS-Dfam_1.0