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view test-data/fake_repbase.embl @ 5:8404aa79a631 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 9c21a3564ebac92db23e2d827dabe6b05c56ad32
author iuc
date Wed, 23 May 2018 14:24:14 -0400
parents 04f5c3d7448e
children
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CC Fake repbase-like embl file, using data from DfamConsensus.embl*
CC ****************************************************************
XX
ID   ACROBAT1     repeatmasker; DNA;  ???;  768 BP.
CC   consensus - See RepBase for additional annotations.
XX
SQ   Sequence 768 BP; 178 A; 194 C; 215 G; 181 T; 0 other;
     ggtgatgctg ccaacttact gatttagtgt atgatggtgt ttttgaggtg ctccagtggc   60
     ttctgtttct atcagctgtc cctcctgttc agctactgac ggggtggtgc gtaacggcaa   120
     aagcaccgcc ggacatcagc gctatctctg ctctcactgc cgtaaaacat ggcaactgca   180
     gttcacttac accgcttctc aacccggtac gcaccagaaa atcattgata tggccatgaa   240
     tggcgttgga tgccgggcaa cagcccgcat tatgggcgtt ggcctcaaca cgattttacg   300
     tcacttaaaa aactcaggcc gcagtcggta acctcgcgca tacagccggg cagtgacgtc   360
     atcgtctgcg cggaaatgga cgaacagtgg ggctatgtcg gggctaaatc gcgccagcgc   420
     tggctgtttt acgcgtatga cagtctccgg aagacggttg ttgcgcacgt attcggtgaa   480
     cgcactatgg cgacgctggg gcgtcttatg agcctgctgt caccctttga cgtggtgata   540
     tggatgacgg atggctggcc gctgtatgaa tcccgcctga agggaaagct gcacgtaatc   600
     agcaagcgat atacgcagcg aattgagcgg cataacctga atctgaggca gcacctggca   660
     cggctgggac ggaagtcgct gtcgttctca aaatcggtgg agctgcatga caaagtcatc   720
     gggcattatc tgaacataaa acactatcaa taagttggag tcattacc                768
//