Mercurial > repos > bgruening > run_jupyter_job

comparison run_jupyter_job.xml @ 2:bf2963c9bcdc draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/jupyter_job commit c21261bb8373090c26cf5195134b30538b5bc714
author bgruening
date Fri, 20 Jan 2023 10:49:03 +0000
parents c93b2676a27d
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1:c93b2676a27d 2:bf2963c9bcdc
1 <tool id="run_jupyter_job" name="Run long running jupyterlab script" hidden="true" version="0.0.1" profile="20.09"> 1 <tool id="run_jupyter_job" name="Run long running jupyterlab script" hidden="true" version="0.0.1" profile="22.01">
2 <description>inside a Docker container</description> 2 <description>inside a Docker container</description>
3 <requirements> 3 <requirements>
4 <container type="docker">docker.io/anupkumar/docker-ml-jupyterlab:galaxy-integration-0.1</container> 4 <container type="docker">docker.io/anupkumar/docker-ml-jupyterlab:galaxy-integration-0.2</container>
5 </requirements> 5 </requirements>
6 <command detect_errors="aggressive"><![CDATA[ 6 <command detect_errors="aggressive"><![CDATA[
7 python '${__tool_directory__}/main.py' 7 python '${__tool_directory__}/main.py'
8 --ml_paths '$ml_h5_dataset_paths' 8 --ml_paths '$ml_h5_dataset_paths'
9 --loaded_file '$select_file' 9 --loaded_file '$select_file'