Mercurial > repos > bgruening > salmonquantmerge

view test-data/cached_locally/prebuilt_index/quasi_index.log @ 2:178ebdfe5a7e draft

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"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/salmon commit c17bc974bf9bbaa1fc1e47ea72162fd244f0e612"
author bgruening
date Tue, 15 Oct 2019 12:01:50 -0400
parents 43658f594542
children
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[2019-09-08 20:35:10.409] [jointLog] [info] [Step 1 of 4] : counting k-mers
[2019-09-08 20:35:10.412] [jointLog] [info] Replaced 0 non-ATCG nucleotides
[2019-09-08 20:35:10.412] [jointLog] [info] Clipped poly-A tails from 0 transcripts
[2019-09-08 20:35:10.412] [jointLog] [info] Building rank-select dictionary and saving to disk
[2019-09-08 20:35:10.412] [jointLog] [info] done
[2019-09-08 20:35:10.412] [jointLog] [info] Writing sequence data to file . . . 
[2019-09-08 20:35:10.412] [jointLog] [info] done
[2019-09-08 20:35:10.412] [jointLog] [info] Building 32-bit suffix array (length of generalized text is 28,577)
[2019-09-08 20:35:10.413] [jointLog] [info] Building suffix array . . . 
[2019-09-08 20:35:10.445] [jointLog] [info] khash had 18,902 keys
[2019-09-08 20:35:10.445] [jointLog] [info] saving hash to disk . . . 
[2019-09-08 20:35:10.447] [jointLog] [info] done