# HG changeset patch
# User bgruening
# Date 1670441549 0
# Node ID ee72e302b6a32a970eb2117f267e6f5dc440dcf0
# Parent  7e50e8d920dbc42810120f6f5bd767b444012e1b
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/salmon commit 363aead8810baedaff299537616cebdab36a8664

diff -r 7e50e8d920db -r ee72e302b6a3 macros.xml
--- a/macros.xml	Mon Dec 05 15:48:07 2022 +0000
+++ b/macros.xml	Wed Dec 07 19:32:29 2022 +0000
@@ -1,6 +1,6 @@
 <macros>
     <token name="@TOOL_VERSION@">1.9.0</token>
-    <token name="@VERSION_SUFFIX@">1</token>
+    <token name="@VERSION_SUFFIX@">2</token>
     <token name="@IDX_VERSION@">q7</token>
     <token name="@PROFILE_VERSION@">20.01</token>
     <xml name="requirements">
@@ -171,10 +171,7 @@
             </when>
             <when value=""/>
         </conditional>
-        <param name="writeMappings" type="boolean" truevalue="" falsevalue="" checked="False"
-            label="Write Mappings to Bam File"
-            help="If this option is provided, then the quasi-mapping results will be written out in SAM-compatible format.  By default, output will be directed to stdout, but an alternative file name can be provided instead"/>
-        <param name="consistentHits" type="boolean" truevalue="--consistentHits" falsevalue="" checked="False"
+       <param name="consistentHits" type="boolean" truevalue="--consistentHits" falsevalue="" checked="False"
         label="Consistent Hits"
         help="Force hits gathered during quasi-mapping to be 'consistent' (i.e. co-linear and approximately the right distance apart)."/>
         <param name="quasiCoverage" type="integer" optional="True" label="Quasi Coverage"