Mercurial > repos > bgruening > salmonquantmerge
changeset 5:cfb0849582e1 draft
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/salmon commit dee6a6f4aa8cbee9f81692fc6f3a2e4ad1f3abf6"
| author | bgruening |
|---|---|
| date | Sat, 03 Oct 2020 18:22:17 +0000 |
| parents | 85b3dc9b6830 |
| children | 88c07fc4024c |
| files | test-data/alevin_mat.mtx test-data/alevin_mat.mtx.gz vpolo_convert.py |
| diffstat | 3 files changed, 104 insertions(+), 2 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/alevin_mat.mtx Sat Oct 03 18:22:17 2020 +0000 @@ -0,0 +1,101 @@ +%%MatrixMarket matrix coordinate real general +95 61 99 +1 9 1.000000 +2 28 1.000000 +3 38 1.000000 +4 28 1.000000 +5 42 1.000000 +6 9 1.000000 +7 56 1.000000 +8 28 1.000000 +9 28 1.000000 +10 30 1.000000 +11 53 1.000000 +12 4 1.000000 +13 28 1.000000 +14 56 1.000000 +15 9 1.000000 +16 43 0.500000 +16 45 0.500000 +17 42 0.500000 +17 44 0.500000 +18 28 1.000000 +19 46 1.000000 +20 38 1.000000 +21 40 1.000000 +22 19 1.000000 +23 9 1.000000 +24 56 1.000000 +25 8 1.000000 +26 28 1.000000 +27 53 1.000000 +28 56 1.000000 +29 28 1.000000 +30 30 1.000000 +31 38 1.000000 +32 28 1.000000 +33 30 1.000000 +34 34 1.000000 +35 30 1.000000 +36 28 1.000000 +37 34 1.000000 +38 16 1.000000 +39 19 1.000000 +40 47 1.000000 +41 38 1.000000 +42 28 1.000000 +43 56 1.000000 +44 28 1.000000 +45 9 1.000000 +46 19 1.000000 +47 23 1.000000 +48 43 0.500000 +48 45 0.500000 +49 38 1.000000 +50 57 1.000000 +51 40 1.000000 +52 38 1.000000 +53 19 1.000000 +54 16 1.000000 +55 15 1.000000 +56 56 1.000000 +57 53 1.000000 +58 30 1.000000 +59 9 1.000000 +60 34 1.000000 +61 30 1.000000 +62 24 1.000000 +63 30 1.000000 +64 56 1.000000 +65 9 1.000000 +66 23 1.000000 +67 61 1.000000 +68 38 1.000000 +69 21 1.000000 +70 38 1.000000 +71 38 1.000000 +72 16 1.000000 +73 30 1.000000 +74 16 1.000000 +75 30 1.000000 +76 40 1.000000 +77 52 1.000000 +78 53 1.000000 +79 42 0.500000 +79 44 0.500000 +80 34 1.000000 +81 9 1.000000 +82 15 1.000000 +83 45 1.000000 +84 47 1.000000 +85 40 1.000000 +86 56 1.000000 +87 56 1.000000 +88 34 1.000000 +89 56 1.000000 +90 38 1.000000 +91 53 1.000000 +92 56 1.000000 +93 53 1.000000 +94 38 1.000000 +95 53 1.000000
--- a/vpolo_convert.py Mon Jul 13 17:14:25 2020 -0400 +++ b/vpolo_convert.py Sat Oct 03 18:22:17 2020 +0000 @@ -1,8 +1,9 @@ #!/usr/bin/env python +import argparse +import os from vpolo.alevin import parser as par -import argparse -import os + parser = argparse.ArgumentParser() parser.add_argument("--mtx", "-m", action="store_true", help="--dumpMtx flag set")