Mercurial > repos > bgruening > sklearn_build_pipeline

comparison pipeline.xml @ 4:86450dde8682 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 8cf3d813ec755166ee0bd517b4ecbbd4f84d4df1
author bgruening
date Thu, 23 Aug 2018 16:14:48 -0400
parents 0857964e07c2
children 242ca5bcd403
comparison
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3:0857964e07c2 4:86450dde8682
18 <configfile name="sklearn_pipeline_script"> 18 <configfile name="sklearn_pipeline_script">
19 <![CDATA[ 19 <![CDATA[
20 import sys 20 import sys
21 import os 21 import os
22 import json 22 import json
23 import pickle
24 import pprint 23 import pprint
25 import skrebate 24 import skrebate
26 from sklearn import (preprocessing, svm, linear_model, ensemble, naive_bayes, 25 from sklearn import (preprocessing, svm, linear_model, ensemble, naive_bayes,
27 tree, neighbors, decomposition, kernel_approximation, cluster) 26 tree, neighbors, decomposition, kernel_approximation, cluster)
28 from sklearn.pipeline import Pipeline 27 from sklearn.pipeline import Pipeline
316 .. _`cluster.FeatureAgglomeration`: http://scikit-learn.org/stable/modules/generated/sklearn.cluster.FeatureAgglomeration.html 315 .. _`cluster.FeatureAgglomeration`: http://scikit-learn.org/stable/modules/generated/sklearn.cluster.FeatureAgglomeration.html
317 .. _`skrebate`: https://epistasislab.github.io/scikit-rebate/using/ 316 .. _`skrebate`: https://epistasislab.github.io/scikit-rebate/using/
318 317
319 ]]> 318 ]]>
320 </help> 319 </help>
321 <expand macro="sklearn_citation"/> 320 <expand macro="sklearn_citation">
321 <expand macro="skrebate_citation"/>
322 <expand macro="xgboost_citation"/>
323 </expand>
322 </tool> 324 </tool>