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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 57a0433defa3cbc37ab34fbb0ebcfaeb680db8d5
author bgruening
date Sun, 05 Nov 2023 15:52:21 +0000
parents a16f33c6ca64
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
bgruening
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diff changeset
1 {
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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2 "class_name": "Sequential",
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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3 "config": {
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4 "name": "sequential",
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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5 "layers": [
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6 {
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7 "class_name": "InputLayer",
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8 "config": {
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9 "batch_input_shape": [
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14 ],
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15 "dtype": "float32",
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18 "name": "conv2d_input"
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19 }
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20 },
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21 {
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22 "class_name": "Conv2D",
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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23 "config": {
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24 "name": "conv2d",
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25 "trainable": true,
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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26 "batch_input_shape": [
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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29 32,
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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32 "dtype": "float32",
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33 "filters": 32,
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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34 "kernel_size": [
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42 "padding": "same",
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43 "data_format": "channels_last",
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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49 "activation": "relu",
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50 "use_bias": true,
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51 "kernel_initializer": {
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52 "class_name": "GlorotUniform",
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53 "config": {
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55 }
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56 },
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57 "bias_initializer": {
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58 "class_name": "Zeros",
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59 "config": {}
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60 },
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61 "kernel_regularizer": null,
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62 "bias_regularizer": null,
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63 "activity_regularizer": null,
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67 },
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68 {
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69 "class_name": "MaxPooling2D",
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70 "config": {
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71 "name": "max_pooling2d",
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72 "trainable": true,
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73 "dtype": "float32",
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74 "pool_size": [
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78 "padding": "valid",
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83 "data_format": "channels_last"
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86 {
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87 "class_name": "Dropout",
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88 "config": {
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89 "name": "dropout",
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90 "trainable": true,
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91 "dtype": "float32",
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92 "rate": 0.25,
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93 "noise_shape": null,
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94 "seed": null
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96 },
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97 {
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98 "class_name": "Conv2D",
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99 "config": {
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100 "name": "conv2d_1",
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bgruening
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101 "trainable": true,
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102 "dtype": "float32",
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103 "filters": 64,
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104 "kernel_size": [
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107 ],
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108 "strides": [
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111 ],
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112 "padding": "same",
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113 "data_format": "channels_last",
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114 "dilation_rate": [
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116 1
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117 ],
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118 "groups": 1,
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119 "activation": "relu",
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120 "use_bias": true,
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121 "kernel_initializer": {
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122 "class_name": "GlorotUniform",
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123 "config": {
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124 "seed": null
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125 }
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126 },
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127 "bias_initializer": {
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128 "class_name": "Zeros",
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129 "config": {}
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130 },
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131 "kernel_regularizer": null,
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132 "bias_regularizer": null,
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133 "activity_regularizer": null,
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134 "kernel_constraint": null,
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135 "bias_constraint": null
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136 }
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137 },
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138 {
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139 "class_name": "MaxPooling2D",
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140 "config": {
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141 "name": "max_pooling2d_1",
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142 "trainable": true,
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bgruening
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143 "dtype": "float32",
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bgruening
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144 "pool_size": [
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145 2,
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146 2
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147 ],
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bgruening
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148 "padding": "valid",
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149 "strides": [
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151 2
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152 ],
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153 "data_format": "channels_last"
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bgruening
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154 }
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155 },
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156 {
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157 "class_name": "Dropout",
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bgruening
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158 "config": {
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159 "name": "dropout_1",
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bgruening
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160 "trainable": true,
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161 "dtype": "float32",
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bgruening
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162 "rate": 0.25,
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bgruening
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163 "noise_shape": null,
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bgruening
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164 "seed": null
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bgruening
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165 }
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166 },
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167 {
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168 "class_name": "Flatten",
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169 "config": {
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170 "name": "flatten",
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bgruening
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171 "trainable": true,
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bgruening
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172 "dtype": "float32",
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bgruening
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173 "data_format": "channels_last"
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bgruening
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174 }
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175 },
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176 {
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177 "class_name": "Dense",
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178 "config": {
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179 "name": "dense",
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bgruening
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180 "trainable": true,
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bgruening
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181 "dtype": "float32",
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bgruening
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182 "units": 512,
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bgruening
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183 "activation": "relu",
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bgruening
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184 "use_bias": true,
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
bgruening
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185 "kernel_initializer": {
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bgruening
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186 "class_name": "GlorotUniform",
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bgruening
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187 "config": {
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
bgruening
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188 "seed": null
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
bgruening
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diff changeset
189 }
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
bgruening
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diff changeset
190 },
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bgruening
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191 "bias_initializer": {
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bgruening
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192 "class_name": "Zeros",
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
bgruening
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193 "config": {}
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bgruening
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194 },
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bgruening
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195 "kernel_regularizer": null,
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bgruening
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196 "bias_regularizer": null,
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bgruening
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diff changeset
197 "activity_regularizer": null,
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198 "kernel_constraint": null,
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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199 "bias_constraint": null
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200 }
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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201 },
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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202 {
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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203 "class_name": "Dropout",
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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204 "config": {
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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205 "name": "dropout_2",
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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206 "trainable": true,
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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207 "dtype": "float32",
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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208 "rate": 0.5,
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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209 "noise_shape": null,
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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210 "seed": null
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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211 }
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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212 },
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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213 {
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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214 "class_name": "Dense",
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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215 "config": {
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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216 "name": "dense_1",
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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217 "trainable": true,
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218 "dtype": "float32",
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219 "units": 10,
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220 "activation": "softmax",
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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221 "use_bias": true,
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222 "kernel_initializer": {
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223 "class_name": "GlorotUniform",
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224 "config": {
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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225 "seed": null
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226 }
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227 },
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228 "bias_initializer": {
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229 "class_name": "Zeros",
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230 "config": {}
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231 },
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232 "kernel_regularizer": null,
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233 "bias_regularizer": null,
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234 "activity_regularizer": null,
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235 "kernel_constraint": null,
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236 "bias_constraint": null
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237 }
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238 }
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239 ]
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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240 },
a16f33c6ca64 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 9981e25b00de29ed881b2229a173a8c812ded9bb
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241 "keras_version": "2.10.0",
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242 "backend": "tensorflow"
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243 }