Mercurial > repos > bgruening > sklearn_discriminant_classifier

comparison main_macros.xml @ 7:cdb7948427aa draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 2e1e78576b38110cf5b1f2ed83b08b9c3a6cbfee
author bgruening
date Sat, 28 Apr 2018 18:09:56 -0400
parents e44443b071da
children b1c2fe7df3f3
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6:e44443b071da 7:cdb7948427aa
421 </conditional> 421 </conditional>
422 </xml> 422 </xml>
423 423
424 <xml name="clf_inputs" token_label1="Dataset containing true labels (tabular):" token_label2="Dataset containing predicted values (tabular):" token_multiple1="False" token_multiple="False"> 424 <xml name="clf_inputs" token_label1="Dataset containing true labels (tabular):" token_label2="Dataset containing predicted values (tabular):" token_multiple1="False" token_multiple="False">
425 <param name="infile1" type="data" format="tabular" label="@LABEL1@"/> 425 <param name="infile1" type="data" format="tabular" label="@LABEL1@"/>
426 <param name="header1" type="boolean" optional="True" truevalue="booltrue" falsevalue="boolfalse" checked="False" label="Does the dataset contain header:" />
426 <param name="col1" multiple="@MULTIPLE1@" type="data_column" data_ref="infile1" label="Select the target column:"/> 427 <param name="col1" multiple="@MULTIPLE1@" type="data_column" data_ref="infile1" label="Select the target column:"/>
427 <param name="infile2" type="data" format="tabular" label="@LABEL2@"/> 428 <param name="infile2" type="data" format="tabular" label="@LABEL2@"/>
429 <param name="header2" type="boolean" optional="True" truevalue="booltrue" falsevalue="boolfalse" checked="False" label="Does the dataset contain header:" />
428 <param name="col2" multiple="@MULTIPLE@" type="data_column" data_ref="infile2" label="Select target column(s):"/> 430 <param name="col2" multiple="@MULTIPLE@" type="data_column" data_ref="infile2" label="Select target column(s):"/>
429 </xml> 431 </xml>
430 432
431 <xml name="multiple_input" token_name="input_files" token_max_num="10" token_format="txt" token_label="Sparse matrix file (.mtx, .txt)" token_help_text="Specify a sparse matrix file in .txt format."> 433 <xml name="multiple_input" token_name="input_files" token_max_num="10" token_format="txt" token_label="Sparse matrix file (.mtx, .txt)" token_help_text="Specify a sparse matrix file in .txt format.">
432 <repeat name="@NAME@" min="1" max="@MAX_NUM@" title="Select input file(s):"> 434 <repeat name="@NAME@" min="1" max="@MAX_NUM@" title="Select input file(s):">
833 <param name="indices" type="boolean" optional="true" truevalue="booltrue" falsevalue="boolfalse" checked="false" label="Indices" help="If True, the return value will be an array of integers, rather than a boolean mask."/> 835 <param name="indices" type="boolean" optional="true" truevalue="booltrue" falsevalue="boolfalse" checked="false" label="Indices" help="If True, the return value will be an array of integers, rather than a boolean mask."/>
834 </when> 836 </when>
835 </conditional> 837 </conditional>
836 </xml> 838 </xml>
837 839
840 <xml name="model_validation_common_options">
841 <param argument="cv" type="integer" value="" optional="true" label="cv" help="The number of folds in a (Stratified)KFold" />
842 <expand macro="n_jobs"/>
843 <expand macro="verbose"/>
844 <yield/>
845 </xml>
846
847 <xml name="scoring">
848 <param argument="scoring" type="text" value="" optional="true" label="scoring" help="A metric used to evaluate the estimator"/>
849 </xml>
850
851 <xml name="pre_dispatch">
852 <param argument="pre_dispatch" type="text" value="all" optional="true" label="pre_dispatch" help="Number of predispatched jobs for parallel execution"/>
853 </xml>
854
838 <!-- Outputs --> 855 <!-- Outputs -->
839 856
840 <xml name="output"> 857 <xml name="output">
841 <outputs> 858 <outputs>
842 <data format="tabular" name="outfile_predict"> 859 <data format="tabular" name="outfile_predict">