Mercurial > repos > bgruening > sklearn_feature_selection
comparison feature_selection.xml @ 14:dc411a215138 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 8cf3d813ec755166ee0bd517b4ecbbd4f84d4df1
| author | bgruening |
|---|---|
| date | Thu, 23 Aug 2018 16:16:26 -0400 |
| parents | f8dfdb47508b |
| children | 026667802750 |
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| 13:f8dfdb47508b | 14:dc411a215138 |
|---|---|
| 19 import os | 19 import os |
| 20 import json | 20 import json |
| 21 import pandas | 21 import pandas |
| 22 import sklearn.feature_selection | 22 import sklearn.feature_selection |
| 23 | 23 |
| 24 execfile("$__tool_directory__/utils.py") | 24 execfile("$__tool_directory__/sk_whitelist.py") |
| 25 execfile("$__tool_directory__/utils.py", globals()) | |
| 25 | 26 |
| 26 safe_eval = SafeEval() | 27 safe_eval = SafeEval() |
| 27 | 28 |
| 28 input_json_path = sys.argv[1] | 29 input_json_path = sys.argv[1] |
| 29 with open(input_json_path, "r") as param_handler: | 30 with open(input_json_path, "r") as param_handler: |
| 259 For information about classification metric functions and their parameter settings please refer to `Scikit-learn classification metrics`_. | 260 For information about classification metric functions and their parameter settings please refer to `Scikit-learn classification metrics`_. |
| 260 | 261 |
| 261 .. _`Scikit-learn classification metrics`: http://scikit-learn.org/stable/modules/model_evaluation.html#classification-metrics | 262 .. _`Scikit-learn classification metrics`: http://scikit-learn.org/stable/modules/model_evaluation.html#classification-metrics |
| 262 ]]> | 263 ]]> |
| 263 </help> | 264 </help> |
| 264 <expand macro="sklearn_citation"/> | 265 <expand macro="sklearn_citation"> |
| 266 <expand macro="skrebate_citation"/> | |
| 267 <expand macro="xgboost_citation"/> | |
| 268 </expand> | |
| 265 </tool> | 269 </tool> |