Mercurial > repos > bgruening > sklearn_generalized_linear

comparison main_macros.xml @ 2:3326dd4f1e8d draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tools/sklearn commit 641ac64ded23fbb6fe85d5f13926da12dcce4e76
author bgruening
date Tue, 13 Mar 2018 04:58:51 -0400
parents 8e02b727dd74
children be8d2100f07b
comparison
equal deleted inserted replaced
1:8e02b727dd74 2:3326dd4f1e8d
1 <macros> 1 <macros>
2 <token name="@VERSION@">0.9</token> 2 <token name="@VERSION@">0.9</token>
3 3
4 <token name="@COLUMNS_FUNCTION@"> 4 <token name="@COLUMNS_FUNCTION@">
5 def columns(f,c): 5 def read_columns(f, c, **args):
6 data = pandas.read_csv(f, sep='\t', header=None, index_col=None, parse_dates=True, encoding=None, tupleize_cols=False) 6 data = pandas.read_csv(f, **args)
7 cols = c.split (',') 7 cols = c.split (',')
8 cols = map(int, cols) 8 cols = map(int, cols)
9 cols = list(map(lambda x: x - 1, cols)) 9 cols = list(map(lambda x: x - 1, cols))
10 y = data.iloc[:,cols].values 10 y = data.iloc[:,cols].values
11 return y 11 return y