Mercurial > repos > bgruening > sklearn_generalized_linear
diff generalized_linear.xml @ 10:44699d79d908 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 97c4f22cdcfa6cddeeffc7b102c418a7ff12a888
author | bgruening |
---|---|
date | Tue, 05 Jun 2018 06:47:46 -0400 |
parents | fd6c50f21cd0 |
children | 6cf4b82c72bc |
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--- a/generalized_linear.xml Wed May 30 08:26:49 2018 -0400 +++ b/generalized_linear.xml Tue Jun 05 06:47:46 2018 -0400 @@ -34,9 +34,15 @@ #if $selected_tasks.selected_algorithms.input_options.selected_input=="tabular": header = 'infer' if params["selected_tasks"]["selected_algorithms"]["input_options"]["header1"] else None +column_option = params["selected_tasks"]["selected_algorithms"]["input_options"]["column_selector_options_1"]["selected_column_selector_option"] +if column_option == "by_index_number": + c = params["selected_tasks"]["selected_algorithms"]["input_options"]["column_selector_options_1"]["col1"] +else: + c = None X = read_columns( "$selected_tasks.selected_algorithms.input_options.infile1", - "$selected_tasks.selected_algorithms.input_options.col1", + c = c, + c_option = column_option, sep='\t', header=header, parse_dates=True @@ -46,9 +52,15 @@ #end if header = 'infer' if params["selected_tasks"]["selected_algorithms"]["input_options"]["header2"] else None +column_option = params["selected_tasks"]["selected_algorithms"]["input_options"]["column_selector_options_2"]["selected_column_selector_option2"] +if column_option == "by_index_number": + c = params["selected_tasks"]["selected_algorithms"]["input_options"]["column_selector_options_2"]["col2"] +else: + c = None y = read_columns( "$selected_tasks.selected_algorithms.input_options.infile2", - "$selected_tasks.selected_algorithms.input_options.col2", + c = c, + c_option = column_option, sep='\t', header=header, parse_dates=True