Mercurial > repos > bgruening > text_processing

diff sed.xml @ 5:20344ce0c811 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/text_processing commit b9d202134c3c6d0e5c398c3ae75e410067fcfc52
author bgruening
date Wed, 23 Nov 2016 15:56:41 -0500
parents 5314e5d6f040
children 60edf2f8c28f
line wrap: on
line diff
--- a/sed.xml	Fri Mar 18 15:17:27 2016 -0400
+++ b/sed.xml	Wed Nov 23 15:56:41 2016 -0500
@@ -3,9 +3,9 @@
     <macros>
         <import>macros.xml</import>
     </macros>
-    <expand macro="requirements">
-        <requirement type="package" version="4.2.2-sandbox">gnu_sed</requirement>
-    </expand>
+    <requirements>
+        <requirement type="package" version="4.2.3.dev0">sed</requirement>
+    </requirements>
     <version_command>sed --version | head -n 1</version_command>
     <command>
 <![CDATA[
@@ -20,6 +20,11 @@
         > '$output'
 ]]>
     </command>
+    <configfiles>
+        <configfile name="sed_script">
+          $code
+        </configfile>
+    </configfiles>
     <inputs>
         <param format="txt" name="infile" type="data" label="File to process" />
         <param name="code" type="text" area="true" size="5x35" label="SED Program" help="">
@@ -43,11 +48,6 @@
             </when>
         </conditional>
     </inputs>
-    <configfiles>
-        <configfile name="sed_script">
-          $code
-        </configfile>
-    </configfiles>
     <outputs>
         <data name="output" format_source="infile" metadata_source="infile" />
     </outputs>
@@ -84,7 +84,6 @@
 - Long sed tutorial (http://www.grymoire.com/Unix/Sed.html)
 - sed faq with good examples (http://sed.sourceforge.net/sedfaq.html)
 - sed cheat-sheet (http://www.catonmat.net/download/sed.stream.editor.cheat.sheet.pdf)
-- Collection of useful sed one-liners (http://student.northpark.edu/pemente/sed/sed1line.txt)
 
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