Mercurial > repos > bgruening > trim_galore

comparison trim_galore.xml @ 15:084bbd8ba7b8 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/trim_galore commit 10a9de2adae04249830c880cf0c55edaa196f3f7
author bgruening
date Tue, 30 Jul 2019 06:26:49 -0400
parents 949f01671246
children cd7e644cae1d
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14:949f01671246 15:084bbd8ba7b8
1 <tool id="trim_galore" name="Trim Galore!" version="0.4.3.1" profile="17.01"> 1 <tool id="trim_galore" name="Trim Galore!" version="0.6.3" profile="17.01">
2 <!-- Wrapper compatible with Trim Galore! version 0.4.3 --> 2 <!-- Wrapper compatible with Trim Galore! version 0.6.3 -->
3 <description>Quality and adapter trimmer of reads</description> 3 <description>Quality and adapter trimmer of reads</description>
4 <macros> 4 <macros>
5 <macro name="adapter_trimming"> 5 <macro name="adapter_trimming">
6 <conditional name="trimming"> 6 <conditional name="trimming">
7 <param name="trimming_select" type="select" label="Adapter sequence to be trimmed"> 7 <param name="trimming_select" type="select" label="Adapter sequence to be trimmed">
41 the 3' end that is not directly related to adapter sequence or basecall quality.</help> 41 the 3' end that is not directly related to adapter sequence or basecall quality.</help>
42 </param> 42 </param>
43 </macro> 43 </macro>
44 </macros> 44 </macros>
45 <requirements> 45 <requirements>
46 <requirement type="package" version="0.4.3">trim-galore</requirement> 46 <requirement type="package" version="0.6.3">trim-galore</requirement>
47 </requirements> 47 </requirements>
48 <version_command> 48 <version_command>
49 trim_galore --version 49 trim_galore --version
50 </version_command> 50 </version_command>
51 <command detect_errors="aggressive"><![CDATA[ 51 <command detect_errors="aggressive"><![CDATA[