Mercurial > repos > bgruening > trim_galore

comparison tool_dependencies.xml @ 4:2c1f0fe810f7 draft

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author bgruening
date Wed, 15 Apr 2015 11:32:11 -0400
parents 9109c2c3be1e
children
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3:eb546ac2aab2 4:2c1f0fe810f7
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="cutadapt" version="1.1"> 3 <package name="cutadapt" version="1.8">
4 <install version="1.0"> 4 <repository changeset_revision="980a47047f57" name="package_cutadapt_1_8" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
5 <actions>
6 <action type="download_by_url">http://cutadapt.googlecode.com/files/cutadapt-1.1.tar.gz</action>
7 <action type="move_directory_files">
8 <source_directory>bin</source_directory>
9 <destination_directory>$INSTALL_DIR/bin</destination_directory>
10 </action>
11 <action type="move_directory_files">
12 <source_directory>cutadapt</source_directory>
13 <destination_directory>$INSTALL_DIR/cutadapt</destination_directory>
14 </action>
15 <action type="set_environment">
16 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
17 </action>
18 </actions>
19 </install>
20 <readme>
21 </readme>
22 </package> 5 </package>
23 </tool_dependency> 6 </tool_dependency>
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