Mercurial > repos > bgruening > trim_galore
diff test-data/paired_collection_example_results3gz.txt @ 11:80cd83b11214 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/trim_galore commit 78bee2b2efd36fe9399ce574159fc007cb6bdfbf
| author | bgruening |
|---|---|
| date | Mon, 24 Apr 2017 14:30:07 -0400 |
| parents | b4e39d993fc8 |
| children | 084bbd8ba7b8 |
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--- a/test-data/paired_collection_example_results3gz.txt Thu Apr 20 09:14:30 2017 -0400 +++ b/test-data/paired_collection_example_results3gz.txt Mon Apr 24 14:30:07 2017 -0400 @@ -3,8 +3,8 @@ ========================== Input filename: input_1.fastq.gz Trimming mode: paired-end -Trim Galore version: 0.4.0 -Cutadapt version: 1.8 +Trim Galore version: 0.4.3 +Cutadapt version: 1.13 Quality Phred score cutoff: 20 Quality encoding type selected: ASCII+33 Adapter sequence: 'CTGTCTCTTATA' (Nextera Transposase sequence; auto-detected) @@ -16,10 +16,10 @@ Output file will be GZIP compressed -This is cutadapt 1.8 with Python 3.5.3 +This is cutadapt 1.13 with Python 3.5.3 Command line parameters: -f fastq -e 0.1 -q 20 -O 1 -a CTGTCTCTTATA input_1.fastq.gz -Trimming 1 adapter(s) with at most 10.0% errors in single-end mode ... -Finished in 0.10 s (1010 us/read; 0.06 M reads/minute). +Trimming 1 adapter with at most 10.0% errors in single-end mode ... +Finished in 0.01 s (101 us/read; 0.59 M reads/minute). === Summary === @@ -86,8 +86,8 @@ ========================== Input filename: input_2.fastq.gz Trimming mode: paired-end -Trim Galore version: 0.4.0 -Cutadapt version: 1.8 +Trim Galore version: 0.4.3 +Cutadapt version: 1.13 Quality Phred score cutoff: 20 Quality encoding type selected: ASCII+33 Adapter sequence: 'CTGTCTCTTATA' (Nextera Transposase sequence; auto-detected) @@ -99,10 +99,10 @@ Output file will be GZIP compressed -This is cutadapt 1.8 with Python 3.5.3 +This is cutadapt 1.13 with Python 3.5.3 Command line parameters: -f fastq -e 0.1 -q 20 -O 1 -a CTGTCTCTTATA input_2.fastq.gz -Trimming 1 adapter(s) with at most 10.0% errors in single-end mode ... -Finished in 0.10 s (1000 us/read; 0.06 M reads/minute). +Trimming 1 adapter with at most 10.0% errors in single-end mode ... +Finished in 0.01 s (100 us/read; 0.60 M reads/minute). === Summary ===