Mercurial > repos > bgruening > wtdbg

changeset 1:e100f3f4d80e draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/wtdbg commit 86e726ecaf8528dc655a5290bbd22797bd8d1ebf
author bgruening
date Thu, 27 Sep 2018 17:52:13 -0400
parents 6a060928f7ff
children 2668027a533b
files macros.xml wtdbg.xml
diffstat 2 files changed, 11 insertions(+), 11 deletions(-) [+]
line wrap: on
line diff
--- a/macros.xml	Tue Jun 12 13:40:49 2018 -0400
+++ b/macros.xml	Thu Sep 27 17:52:13 2018 -0400
@@ -1,22 +1,22 @@
 <macros>
     <xml name="requirements">
         <requirements>
-        <requirement type="package" version="1.2.8.1">wtdbg</requirement>
+        <requirement type="package" version="2.0">wtdbg</requirement>
             <yield/>
         </requirements>
     </xml>
     <xml name="citations">
         <citations>
             <citation type="bibtex">
-@misc{githubwtdbg-1.2.8,
-  author = {LastTODO, FirstTODO},
-  year = {TODO},
-  title = {wtdbg-1.2.8},
+@misc{githubwtdbg-2,
+  author = {Ruan, Jue},
+  year = {2018},
+  title = {wtdbg-2},
   publisher = {GitHub},
   journal = {GitHub repository},
-  url = {https://github.com/ruanjue/wtdbg-1.2.8},
+  url = {https://github.com/ruanjue/wtdbg2},
 }</citation>
             <yield />
         </citations>
     </xml>
-</macros>
\ No newline at end of file
+</macros>
--- a/wtdbg.xml	Tue Jun 12 13:40:49 2018 -0400
+++ b/wtdbg.xml	Thu Sep 27 17:52:13 2018 -0400
@@ -1,14 +1,14 @@
-<tool id="wtdbg" name="WTDBG" version="1.2.8.1">
+<tool id="wtdbg" name="WTDBG" version="2.0">
     <description>De novo assembler AND consensuser for long noisy sequences</description>
     <macros>
         <import>macros.xml</import>
     </macros>
     <expand macro="requirements" />
-    <version_command>wtdbg -help | grep 'Version:'</version_command>
+    <version_command>wtdbg2 -help | grep 'Version:'</version_command>
     <command detect_errors="exit_code"><![CDATA[
-    wtdbg
+    wtdbg2
         -t \${GALAXY_SLOTS:-4} 
-        -i $i
+        -i '$i'
         -o 'dbg' 
         #if $I:
             -I '$I'