Mercurial > repos > biancakrieger > nc_rna_enios

comparison lncadeep.xml @ 5:d72d2ed9efac draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Deleted selected files
author biancakrieger
date Wed, 21 Apr 2021 10:35:29 +0000
parents 1831c7f4c173
children
comparison
equal deleted inserted replaced
4:1831c7f4c173 5:d72d2ed9efac
1 <tool id="lncadeep" name="LncADeep" >
2 <description>"LncADeep"</description>
3 <requirements>
4 <container type="docker">bianca7/lncadeep</container>
5 </requirements>
6 <command><![CDATA[python /usr/local/lib/python2.7/site-packages/LncADeep/LncADeep.py -MODE anno
7 -o test
8 -l $RNA_FILE
9 -p $PROTEIN_FILE
10 -a 1
11 && tar -cvf results.tar test_LncADeep_anno_results && mv results.tar $results
12 ]]></command>
13 <inputs>
14 <param type="data" name="RNA_FILE" format="fasta" label="RNA sequences in FASTA format" />
15 <param type="data" name="PROTEIN_FILE" format="fasta" label="protein sequences in FASTA format" />
16 </inputs>
17 <outputs>
18 <data name="results" format="tar" />
19 </outputs>
20 </tool>