|
4
|
1 <?xml version="1.0"?>
|
|
|
2 <tool_dependency>
|
|
|
3 <set_environment version="1.0">
|
|
|
4 <environment_variable action="set_to" name="SCRIPT_PATH">$REPOSITORY_INSTALL_DIR</environment_variable>
|
|
|
5 </set_environment>
|
|
|
6
|
|
10
|
7 <!--package name="R" version="3.0.1">
|
|
6
|
8 <repository changeset_revision="c5ff6dd33c79" name="package_r_3_0_1" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu" />
|
|
4
|
9 </package>
|
|
|
10
|
|
|
11 <package name="degseq" version="1.20.0">
|
|
|
12 <install version="1.0">
|
|
|
13 <actions>
|
|
|
14 <action type="set_environment_for_install">
|
|
6
|
15 <repository changeset_revision="c5ff6dd33c79" name="package_r_3_0_1" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu">
|
|
|
16 <package name="R" version="3.0.1" />
|
|
4
|
17 </repository>
|
|
|
18 </action>
|
|
|
19 <action type="shell_command">R CMD BATCH $REPOSITORY_INSTALL_DIR/install_DEG.R </action>
|
|
|
20 </actions>
|
|
|
21 </install>
|
|
|
22
|
|
|
23
|
|
10
|
24 </package!-->
|
|
|
25
|
|
|
26
|
|
|
27 <package name="R" version="3.0.1">
|
|
11
|
28 <repository changeset_revision="c5ff6dd33c79" name="package_r_3_0_1" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu"/>
|
|
|
29
|
|
10
|
30 <install version="1.0">
|
|
|
31 <actions>
|
|
|
32 <action type="shell_command">R CMD BATCH $REPOSITORY_INSTALL_DIR/install_DEG.R </action>
|
|
|
33 </actions>
|
|
|
34 </install>
|
|
|
35
|
|
|
36
|
|
4
|
37 </package>
|
|
|
38
|
|
|
39
|
|
|
40 </tool_dependency>
|
