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1 <tool id="degseq" name="degseq" veision="1.0.0">
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2 <description>tool for degseq analisis</description>
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3 <requirements>
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4 <requirement type="set_environment">SCRIPT_PATH</requirement>
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5
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5 <requirement type="package" version="3.0.1">R</requirement>
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6 <requirement type="package" version="1.20.0">degseq</requirement>
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7 </requirements>
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8
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9
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10 <command interpreter="perl">DEGseq_2.pl -i $input -column1 4 -mark1 A -column2 5 -mark2 B
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11 </command>
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12
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13 <inputs>
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14 <param name="input" type="data" label="input file"/>
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15 </inputs>
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16
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17 <outputs>
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18 <data format="txt" name="deg" from_work_dir="output_score.txt" label="${tool.name} on ${on_string}: deg"/>
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19 </outputs>
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20 <help>
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21
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22 </help>
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23 </tool>
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