Mercurial > repos > big-tiandm > degseq

comparison tool_dependencies.xml @ 4:5d8069b349e5 draft

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author big-tiandm
date Thu, 30 Oct 2014 03:14:12 -0400
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children 2cdd651b4d01
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3:794bb34e58d4 4:5d8069b349e5
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <set_environment version="1.0">
4 <environment_variable action="set_to" name="SCRIPT_PATH">$REPOSITORY_INSTALL_DIR</environment_variable>
5 </set_environment>
6
7 <package name="R" version="2.11.0">
8 <repository changeset_revision="8d0a55bf7aaf" name="package_r_2_11_0" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" />
9 </package>
10
11 <package name="degseq" version="1.20.0">
12 <install version="1.0">
13 <actions>
14 <action type="set_environment_for_install">
15 <repository changeset_revision="5824d2b3bc8b" name="package_r_2_11_0" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu">
16 <package name="R" version="2.11.0" />
17 </repository>
18 </action>
19 <action type="shell_command">R CMD BATCH $REPOSITORY_INSTALL_DIR/install_DEG.R </action>
20 </actions>
21 </install>
22
23
24 </package>
25
26
27 </tool_dependency>