Mercurial > repos > big-tiandm > degseq
comparison tool_dependencies.xml @ 21:94bc6d663e36 draft
Uploaded
author | big-tiandm |
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date | Sat, 15 Nov 2014 00:58:54 -0500 |
parents | 32970aaa6af8 |
children | b5b3d44170ca |
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20:251c43df4132 | 21:94bc6d663e36 |
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13 <repository changeset_revision="c5ff6dd33c79" name="package_r_3_0_1" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu" prior_installation_required="True"> | 13 <repository changeset_revision="c5ff6dd33c79" name="package_r_3_0_1" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu" prior_installation_required="True"> |
14 <package name="R" version="3.0.1" /> | 14 <package name="R" version="3.0.1" /> |
15 </repository> | 15 </repository> |
16 </action> | 16 </action> |
17 <action type="shell_command">R CMD BATCH $REPOSITORY_INSTALL_DIR/install_DEG.R </action> | 17 <action type="shell_command">R CMD BATCH $REPOSITORY_INSTALL_DIR/install_DEG.R </action> |
18 <action type="shell_command">RPATH=`which R`</action> | |
19 <action type="shell_command">echo "export PATH=$RPATH:$PATH" \> $INSTALL_DIR/env.sh </action> | |
20 <action type="shell_command">chmod 755 SINSTALL_DIR/env.sh </action> | |
18 | 21 |
19 </actions> | 22 </actions> |
20 </install> | 23 </install> |
21 </package> | 24 </package> |
22 | 25 |