Mercurial > repos > big-tiandm > degseq

changeset 1:b3ce04685e8b draft

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Uploaded
author big-tiandm
date Thu, 30 Oct 2014 03:08:02 -0400
parents 0e63c50295bc
children 1ba482e1e082
files DEGseq_2.xml
diffstat 1 files changed, 23 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/DEGseq_2.xml	Thu Oct 30 03:08:02 2014 -0400
@@ -0,0 +1,23 @@
+<tool id="degseq" name="degseq" veision="1.0.0">
+  <description>tool for degseq analisis</description>
+  <requirements>
+    <requirement type="set_environment">SCRIPT_PATH</requirement>
+    <requirement type="package" version="3.0.1">package_r3_withx</requirement>
+    <requirement type="package" version="1.20.0">degseq</requirement>
+  </requirements>
+
+
+ <command interpreter="perl">DEGseq_2.pl -i $input   -column1 4 -mark1 A -column2 5 -mark2 B
+ </command>
+
+  <inputs>
+     <param name="input"  type="data" label="input file"/>
+  </inputs>
+
+  <outputs>
+     <data format="txt" name="deg" from_work_dir="output_score.txt" label="${tool.name} on ${on_string}: deg"/>
+  </outputs>
+ <help>
+
+ </help>
+ </tool>