Mercurial > repos > big-tiandm > sirna_plant

comparison tool_dependencies.xml @ 2:911a4581f480 draft

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author big-tiandm
date Thu, 23 Oct 2014 21:35:28 -0400
parents 07745c0958dd
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1:49ce0a59cbe1 2:911a4581f480
10 <environment_variable action="set_to" name="SCRIPT_PATH">$REPOSITORY_INSTALL_DIR</environment_variable> 10 <environment_variable action="set_to" name="SCRIPT_PATH">$REPOSITORY_INSTALL_DIR</environment_variable>
11 </set_environment> 11 </set_environment>
12 <package name="R" version="2.11.0"> 12 <package name="R" version="2.11.0">
13 <repository changeset_revision="8d0a55bf7aaf" name="package_r_2_11_0" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" /> 13 <repository changeset_revision="8d0a55bf7aaf" name="package_r_2_11_0" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" />
14 </package> 14 </package>
15
16 <package name="threads" version="1.96">
17 <install version="1.0">
18 <actions>
19 <action type="download_by_url">http://www.cpan.org/authors/id/J/JD/JDHEDDEN/threads-1.96.tar.gz</action>
20 <action type="shell_command">perl Makefile.PL PREFIX=$INSTALL_DIR </action>
21 <action type="shell_command">make</action>
22 <action type="shell_command">make install</action>
23 <action type="set_environment">
24 <environment_variable action="prepend_to" name="PERL5LIB">$INSTALL_DIR/lib</environment_variable>
25 </action>
26 </actions>
27 </install>
28 </package>
29
30
31 <package name="Parallel-ForkManager" version="1.06">
32 <install version="1.0">
33 <actions>
34 <action type="download_by_url">http://www.cpan.org/authors/id/S/SZ/SZABGAB/Parallel-ForkManager-1.06.tar.gz</action>
35 <action type="shell_command">perl Makefile.PL PREFIX=$INSTALL_DIR </action>
36 <action type="shell_command">make</action>
37 <action type="shell_command">make install</action>
38 <action type="set_environment">
39 <environment_variable action="prepend_to" name="PERL5LIB">$INSTALL_DIR/lib</environment_variable>
40 </action>
41 </actions>
42 </install>
43 </package>
44
45 <package name="SVG" version="2.59">
46 <install version="1.0">
47 <actions>
48 <action type="download_by_url">http://www.cpan.org/authors/id/S/SZ/SZABGAB/SVG-2.59.tar.gz</action>
49 <action type="shell_command">perl Makefile.PL PREFIX=$INSTALL_DIR </action>
50 <action type="shell_command">make</action>
51 <action type="shell_command">make install</action>
52 <action type="set_environment">
53 <environment_variable action="prepend_to" name="PERL5LIB">$INSTALL_DIR/lib</environment_variable>
54 </action>
55 </actions>
56 </install>
57 </package>
58
59 <package name="Boost-Graph" version="1.4">
60 <install version="1.0">
61 <actions>
62 <action type="download_by_url">http://www.cpan.org/authors/id/D/DB/DBURDICK/BoostGraph/Boost-Graph-1.4.tar.gz</action>
63 <action type="shell_command">perl Makefile.PL PREFIX=$INSTALL_DIR </action>
64 <action type="shell_command">make</action>
65 <action type="shell_command">make install</action>
66 <action type="set_environment">
67 <environment_variable action="prepend_to" name="PERL5LIB">$INSTALL_DIR/lib</environment_variable>
68 </action>
69 </actions>
70 </install>
71 </package>
72
15 </tool_dependency> 73 </tool_dependency>