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1 <!DOCTYPE html>
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2 <html lang="en">
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3 <head>
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4 <meta charset="UTF-8">
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5 <title>COBRAxy Documentation</title>
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6 <meta http-equiv="X-UA-Compatible" content="IE=edge,chrome=1" />
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7 <meta name="description" content="COBRAxy - A Python toolkit for metabolic flux analysis and visualization">
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8 <meta name="viewport" content="width=device-width, initial-scale=1.0, minimum-scale=1.0">
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9 <link rel="stylesheet" href="//cdn.jsdelivr.net/npm/docsify@4/lib/themes/dark.css">
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10 <style>
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11 :root {
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12 --theme-color: #4CAF50;
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13 --text-color-base: #e1e4e8;
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14 --background-color: #0d1117;
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15 --sidebar-background: #161b22;
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16 --code-background: #21262d;
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17 }
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18
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19 body {
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20 background-color: var(--background-color);
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21 color: var(--text-color-base);
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22 }
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23
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24 .sidebar {
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25 background-color: var(--sidebar-background);
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26 border-right: 1px solid #30363d;
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27 }
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28
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29 .sidebar-nav a {
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30 color: var(--text-color-base);
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31 }
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32
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33 .sidebar-nav a:hover {
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34 color: var(--theme-color);
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35 }
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36
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37 .app-name-link {
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38 color: var(--theme-color) !important;
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39 font-weight: 600;
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40 }
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41
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42 .app-name img {
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43 max-height: 50px;
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44 max-width: 250px;
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45 margin-right: 10px;
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46 vertical-align: middle;
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47 }
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48
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49 .sidebar > h1 > img {
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50 max-height: 50px;
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51 width: auto;
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52 }
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53
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54 .markdown-section {
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55 background-color: var(--background-color);
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56 color: var(--text-color-base);
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57 }
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58
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59 .markdown-section code {
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60 background-color: var(--code-background);
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61 color: #f0f6fc;
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62 border-radius: 6px;
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63 padding: 0.2em 0.4em;
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64 border: 1px solid #30363d;
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65 }
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66
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67 .markdown-section pre {
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68 background-color: var(--code-background);
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69 border: 1px solid #30363d;
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70 }
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71
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72 .markdown-section pre > code {
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73 background-color: var(--code-background);
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74 color: #f0f6fc;
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75 }
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76
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77 .markdown-section table {
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78 border-collapse: collapse;
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79 border: 1px solid #30363d;
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80 }
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81
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82 .markdown-section th,
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83 .markdown-section td {
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84 border: 1px solid #30363d;
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85 background-color: var(--code-background);
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86 }
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87
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88 .markdown-section th {
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89 background-color: #21262d;
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90 font-weight: 600;
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91 }
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92 </style>
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93 </head>
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94 <body>
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95 <div id="app"></div>
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96 <script>
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97 window.$docsify = {
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98 name: 'COBRAxy',
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99 logo: './_media/logo.png',
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100 loadSidebar: true,
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101 loadNavbar: false,
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102 subMaxLevel: 3,
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103 auto2top: true,
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104
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105 // Search plugin
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106 search: {
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107 maxAge: 86400000, // Expiration time, the default one day
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108 paths: 'auto',
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109 placeholder: 'Search documentation...',
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110 noData: 'No results found.',
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111 depth: 3
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112 },
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113
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114 // Copy code plugin
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115 copyCode: {
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116 buttonText: 'Copy',
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117 errorText: 'Error',
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118 successText: 'Copied'
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119 },
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120
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121 // Zoom image plugin
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122 zoom: {
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123 selector: '.medium-zoom-image',
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124 delay: 1000,
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125 options: {
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126 bgColor: 'rgba(0,0,0,0.8)',
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127 zIndex: 99999
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128 }
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129 },
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130
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131 // Tabs plugin
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132 tabs: {
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133 persist: true,
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134 sync: true,
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135 theme: 'classic',
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136 tabComments: true,
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137 tabHeadings: true
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138 }
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139 }
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140 </script>
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141
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142 <!-- Core Docsify -->
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143 <script src="//cdn.jsdelivr.net/npm/docsify@4"></script>
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144
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145 <!-- Search plugin -->
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146 <script src="//cdn.jsdelivr.net/npm/docsify/lib/plugins/search.min.js"></script>
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147
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148 <!-- Copy code plugin -->
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149 <script src="//cdn.jsdelivr.net/npm/docsify-copy-code@2"></script>
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150
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151 <!-- Zoom image plugin -->
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152 <script src="//cdn.jsdelivr.net/npm/docsify/lib/plugins/zoom-image.min.js"></script>
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153
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154 <!-- Tabs plugin -->
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155 <script src="//cdn.jsdelivr.net/npm/docsify-tabs@1"></script>
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156
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157 <!-- Code syntax highlighting -->
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158 <script src="//cdn.jsdelivr.net/npm/prismjs@1/components/prism-bash.min.js"></script>
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159 <script src="//cdn.jsdelivr.net/npm/prismjs@1/components/prism-python.min.js"></script>
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160 <script src="//cdn.jsdelivr.net/npm/prismjs@1/components/prism-yaml.min.js"></script>
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161 <script src="//cdn.jsdelivr.net/npm/prismjs@1/components/prism-xml.min.js"></script>
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162 <script src="//cdn.jsdelivr.net/npm/prismjs@1/components/prism-json.min.js"></script>
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163 </body>
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164 </html> |
