Mercurial > repos > bimib > cobraxy

comparison COBRAxy/ras_generator.xml @ 133:0ecd5e8ad8b2 draft

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Uploaded
author luca_milaz
date Sat, 26 Oct 2024 15:01:35 +0000
parents a000027644be
children 2a4d55b5ad79
comparison
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132:a000027644be 133:0ecd5e8ad8b2
30 <when value="Custom"> 30 <when value="Custom">
31 <param name="rule_list" argument="--rule_list" type="data" format="tabular, csv, pickle, p, pk" label="Custom rules" /> 31 <param name="rule_list" argument="--rule_list" type="data" format="tabular, csv, pickle, p, pk" label="Custom rules" />
32 </when> 32 </when>
33 </conditional> 33 </conditional>
34 <param name="input" argument="--input" type="data" format="tabular, csv, tsv" label="Gene Expression dataset:" /> 34 <param name="input" argument="--input" type="data" format="tabular, csv, tsv" label="Gene Expression dataset:" />
35 <param name="name" argument="--name" type="text" label="Dataset's name:" value="Dataset" help="Default: Dataset" /> 35 <param name="name" argument="--name" type="text" label="Dataset's name:" value="Dataset" help="Default: Dataset. Do not use white spaces." />
36 <param name="none" argument="--none" type="boolean" checked="true" label="(A and NaN) solved as (A)?" /> 36 <param name="none" argument="--none" type="boolean" checked="true" label="(A and NaN) solved as (A)?" />
37 </inputs> 37 </inputs>
38 38
39 <outputs> 39 <outputs>
40 <data format="txt" name="log" label="Expression2RAS - $name - Log" /> 40 <data format="txt" name="log" label="Expression2RAS - $name - Log" />
41 <data format="tabular" name="ras_output" label="{$name}_RAS"/> 41 <data format="tabular" name="ras_output" label="$name_RAS"/>
42 </outputs> 42 </outputs>
43 43
44 <help> 44 <help>
45 <![CDATA[ 45 <![CDATA[
46 46