Mercurial > repos > bimib > cobraxy

comparison COBRAxy/ras_to_bounds.xml @ 95:45574f99a807 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author luca_milaz
date Sun, 13 Oct 2024 11:43:50 +0000
parents 7e703e546998
children e70a6363bb82
comparison
equal deleted inserted replaced
94:e844f7dab6fe 95:45574f99a807
27 --medium $medium 27 --medium $medium
28 #end if 28 #end if
29 --ras_selector $cond_ras.ras_choice 29 --ras_selector $cond_ras.ras_choice
30 #if $cond_ras.ras_choice == "True" 30 #if $cond_ras.ras_choice == "True"
31 --input_ras $cond_ras.input_ras 31 --input_ras $cond_ras.input_ras
32 --classes $cond_ras.classes
33 #end if 32 #end if
34 --out_log $log 33 --out_log $log
35 ]]> 34 ]]>
36 </command> 35 </command>
37 <inputs> 36 <inputs>
47 <option value="True" selected="true">Yes</option> 46 <option value="True" selected="true">Yes</option>
48 <option value="False">No</option> 47 <option value="False">No</option>
49 </param> 48 </param>
50 <when value="True"> 49 <when value="True">
51 <param name="input_ras" argument="--input_ras" multiple="true" type="data" format="tabular, csv, tsv" label="RAS matrix:" /> 50 <param name="input_ras" argument="--input_ras" multiple="true" type="data" format="tabular, csv, tsv" label="RAS matrix:" />
52 <param name="classes" argument="--classes" type="text" value="None" label="Classes:" help="Write here the the classes to assign to each of the uploaded RAS matrices. Example for two RAS matrices:'cellNormal, cellCancer'. If you uploaded just one matrix, leave default value." />
53 </when> 51 </when>
54 </conditional> 52 </conditional>
55 53
56 <conditional name="cond_medium"> 54 <conditional name="cond_medium">
57 <expand macro="options_ras_to_bounds_medium"/> 55 <expand macro="options_ras_to_bounds_medium"/>