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comparison COBRAxy/marea_macros.xml @ 228:555e122166b6 draft

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Uploaded
author luca_milaz
date Mon, 16 Dec 2024 19:23:14 +0000
parents 7e703e546998
children
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227:84b31c9100ad 228:555e122166b6
1 <macros> 1 <macros>
2 2
3 <xml name="options"> 3 <xml name="options">
4 <param name="rules_selector" argument="--rules_selector" type="select" label="Gene-Protein-Reaction rules:"> 4 <param name="rules_selector" argument="--rules_selector" type="select" label="Gene-Protein-Reaction rules:">
5 <option value="HMRcore" selected="true">HMRcore rules</option> 5 <option value="HMRcore">HMRcore rules</option>
6 <option value="Recon">Recon 2.2 rules</option> 6 <option value="Recon">Recon 2.2 rules</option>
7 <option value="ENGRO2">ENGRO 2 rules</option> 7 <option value="ENGRO2" selected="true">ENGRO 2 rules</option>
8 <option value="Custom">Custom rules</option> 8 <option value="Custom">Custom rules</option>
9 </param> 9 </param>
10 </xml> 10 </xml>
11 11
12 <xml name="options_ras_to_bounds_model"> 12 <xml name="options_ras_to_bounds_model">
13 <param name="model_selector" argument="--model_selector" type="select" label="Model:"> 13 <param name="model_selector" argument="--model_selector" type="select" label="Model:">
14 <option value="ENGRO2">ENGRO 2</option> 14 <option value="ENGRO2" selected="true">ENGRO 2</option>
15 <option value="Custom">Custom model</option> 15 <option value="Custom">Custom model</option>
16 </param> 16 </param>
17 </xml> 17 </xml>
18 18
19 <xml name="options_ras_to_bounds_medium"> 19 <xml name="options_ras_to_bounds_medium">
20 <param name="medium_selector" argument="--medium_selector" type="select" label="Medium:"> 20 <param name="medium_selector" argument="--medium_selector" type="select" label="Medium:">
21 <option value="allOpen">Open</option> 21 <option value="allOpen" selected="true">Open</option>
22 <option value="Custom">Custom medium</option> 22 <option value="Custom">Custom medium</option>
23 <option value="RPMI_1640">RPMI 1640</option> 23 <option value="RPMI_1640">RPMI 1640</option>
24 <option value="DMEM">DMEM</option> 24 <option value="DMEM">DMEM</option>
25 <option value="EMEM">EMEM</option> 25 <option value="EMEM">EMEM</option>
26 <option value="DMEM:F12_=_1:1">DMEM:F12 = 1:1</option> 26 <option value="DMEM:F12_=_1:1">DMEM:F12 = 1:1</option>