Mercurial > repos > bimib > cobraxy

comparison COBRAxy/ras_to_bounds.py @ 140:63cb32c3d8b1 draft

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Uploaded
author luca_milaz
date Thu, 31 Oct 2024 19:42:40 +0000
parents 03bbbd9af67d
children 726e1dc71f03
comparison
equal deleted inserted replaced
139:74b383211ab5 140:63cb32c3d8b1
225 warning(error_message) 225 warning(error_message)
226 raise ValueError(error_message) 226 raise ValueError(error_message)
227 pass 227 pass
228 ras_class_names = [] 228 ras_class_names = []
229 for file in ras_file_names: 229 for file in ras_file_names:
230 ras_class_names.append(file.split(".")[0]) 230 ras_class_names.append(file.rsplit('.', 1)[0])
231 ras_list = [] 231 ras_list = []
232 class_assignments = pd.DataFrame(columns=["Patient_ID", "Class"]) 232 class_assignments = pd.DataFrame(columns=["Patient_ID", "Class"])
233 for ras_matrix, ras_class_name in zip(ras_file_list, ras_class_names): 233 for ras_matrix, ras_class_name in zip(ras_file_list, ras_class_names):
234 ras = read_dataset(ras_matrix, "ras dataset") 234 ras = read_dataset(ras_matrix, "ras dataset")
235 ras.replace("None", None, inplace=True) 235 ras.replace("None", None, inplace=True)