Mercurial > repos > bimib > cobraxy

comparison COBRAxy/ras_to_bounds.py @ 141:726e1dc71f03 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author luca_milaz
date Thu, 31 Oct 2024 19:53:20 +0000
parents 63cb32c3d8b1
children 3fca9b568faf
comparison
equal deleted inserted replaced
140:63cb32c3d8b1 141:726e1dc71f03
225 warning(error_message) 225 warning(error_message)
226 raise ValueError(error_message) 226 raise ValueError(error_message)
227 pass 227 pass
228 ras_class_names = [] 228 ras_class_names = []
229 for file in ras_file_names: 229 for file in ras_file_names:
230 ras_class_names.append(file.rsplit('.', 1)[0]) 230 ras_class_names.append(file.split(".")[0])
231 ras_list = [] 231 ras_list = []
232 class_assignments = pd.DataFrame(columns=["Patient_ID", "Class"]) 232 class_assignments = pd.DataFrame(columns=["Patient_ID", "Class"])
233 for ras_matrix, ras_class_name in zip(ras_file_list, ras_class_names): 233 for ras_matrix, ras_class_name in zip(ras_file_list, ras_class_names):
234 ras = read_dataset(ras_matrix, "ras dataset") 234 ras = read_dataset(ras_matrix, "ras dataset")
235 ras.replace("None", None, inplace=True) 235 ras.replace("None", None, inplace=True)