Mercurial > repos > bimib > cobraxy

comparison COBRAxy/flux_simulation.py @ 160:e1b0ddc770a9 draft

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Uploaded
author francesco_lapi
date Tue, 12 Nov 2024 17:05:33 +0000
parents 898f2641d3f7
children 9159e12b03fa
comparison
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159:898f2641d3f7 160:e1b0ddc770a9
112 print(s) 112 print(s)
113 113
114 114
115 def write_to_file(dataset: pd.DataFrame, name: str, keep_index:bool=False)->None: 115 def write_to_file(dataset: pd.DataFrame, name: str, keep_index:bool=False)->None:
116 dataset.index.name = 'Reactions' 116 dataset.index.name = 'Reactions'
117 print(ARGS.output_path + name + ".csv")
117 dataset.to_csv(ARGS.output_path + name + ".csv", sep = '\t', index = keep_index) 118 dataset.to_csv(ARGS.output_path + name + ".csv", sep = '\t', index = keep_index)
118 119
119 ############################ dataset input #################################### 120 ############################ dataset input ####################################
120 def read_dataset(data :str, name :str) -> pd.DataFrame: 121 def read_dataset(data :str, name :str) -> pd.DataFrame:
121 """ 122 """