Mercurial > repos > bimib > cobraxy

comparison COBRAxy/utils/model_utils.py @ 448:f8b1761eee37 draft

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author francesco_lapi
date Thu, 11 Sep 2025 10:30:49 +0000
parents 06564187fba3
children 4e2bc80764b6
comparison
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447:be26d1c603a0 448:f8b1761eee37
182 182
183 print(f"Costruendo modello da {len(df)} reazioni...") 183 print(f"Costruendo modello da {len(df)} reazioni...")
184 184
185 # Prima passata: estrai metaboliti e compartimenti dalle formule delle reazioni 185 # Prima passata: estrai metaboliti e compartimenti dalle formule delle reazioni
186 for idx, row in df.iterrows(): 186 for idx, row in df.iterrows():
187 reaction_formula = str(row['Reaction']).strip() 187 reaction_formula = str(row['Formula']).strip()
188 if not reaction_formula or reaction_formula == 'nan': 188 if not reaction_formula or reaction_formula == 'nan':
189 continue 189 continue
190 190
191 # Estrai metaboliti dalla formula della reazione 191 # Estrai metaboliti dalla formula della reazione
192 metabolites = extract_metabolites_from_reaction(reaction_formula) 192 metabolites = extract_metabolites_from_reaction(reaction_formula)