--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/COBRAxy/docs/_sidebar.md	Tue Sep 30 14:02:17 2025 +0000
@@ -0,0 +1,20 @@
+<!-- docs/_sidebar.md -->
+
+* [Home](/)
+
+* [Installation](installation.md)
+
+* [Tutorials](tutorials/)
+  * [Galaxy Setup](tutorials/galaxy-setup.md)
+  * [Python API](tutorials/python-api.md)
+
+* [Tools Documentation](tools/)
+  * [RAS Generator](tools/ras-generator.md)
+  * [RPS Generator](tools/rps-generator.md)
+  * [MAREA](tools/marea.md)
+  * [RAS to Bounds](tools/ras-to-bounds.md)
+  * [Flux Simulation](tools/flux-simulation.md)
+  * [Flux to Map](tools/flux-to-map.md)
+  * [Model Setting](tools/metabolic-model-setting.md)
+  * [Tabular to Model](tools/tabular-to-model.md)
+  * [MAREA Cluster](tools/marea-cluster.md)
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