--- a/COBRAxy/flux_simulation.xml	Wed Sep 18 12:36:55 2024 +0000
+++ b/COBRAxy/flux_simulation.xml	Wed Sep 18 12:37:06 2024 +0000
@@ -127,41 +127,6 @@
 
 ]]>
     </help>
-
-    
-        <citations> 
-            <citation type="bibtex">
-                @article{galuzzi2024adjusting,
-                title={Adjusting for false discoveries in constraint-based differential metabolic flux analysis},
-                author={Galuzzi, Bruno G and Milazzo, Luca and Damiani, Chiara},
-                journal={Journal of Biomedical Informatics},
-                volume={150},
-                pages={104597},
-                year={2024},
-                publisher={Elsevier}
-                }
-            </citation>
-            <citation type="bibtex">
-                @inproceedings{galuzzi2022best,
-                title={Best practices in flux sampling of constrained-based models},
-                author={Galuzzi, Bruno G and Milazzo, Luca and Damiani, Chiara},
-                booktitle={International Conference on Machine Learning, Optimization, and Data Science},
-                pages={234--248},
-                year={2022},
-                organization={Springer}
-                }
-            </citation>
-            <citation type="bibtex">
-                @article{ebrahim2013cobrapy,
-                    title={COBRApy: constraints-based reconstruction and analysis for python},
-                    author={Ebrahim, Ali and Lerman, Joshua A and Palsson, Bernhard O and Hyduke, Daniel R},
-                    journal={BMC systems biology},
-                    volume={7},
-                    pages={1--6},
-                    year={2013},
-                    publisher={Springer}
-                    }
-            </citation>
-        </citations>
+    <expand macro="citations_fluxes" />
  
 </tool>
\ No newline at end of file