Mercurial > repos > bimib > cobraxy

diff COBRAxy/flux_to_map.py @ 244:ccb4ae0e01b3 draft

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author francesco_lapi
date Wed, 15 Jan 2025 10:52:04 +0000
parents 5aaf15260ca6
children 58037c24c716
line wrap: on
line diff
--- a/COBRAxy/flux_to_map.py	Wed Jan 15 10:41:57 2025 +0000
+++ b/COBRAxy/flux_to_map.py	Wed Jan 15 10:52:04 2025 +0000
@@ -700,8 +700,8 @@
     # Calculate means and standard deviations
     mean1 = np.nanmean(dataset1Data)
     mean2 = np.nanmean(dataset2Data)
-    std1 = np.std(dataset1Data, ddof=1)
-    std2 = np.std(dataset2Data, ddof=1)
+    std1 = np.nanstd(dataset1Data, ddof=1)
+    std2 = np.nanstd(dataset2Data, ddof=1)
     
     n1 = len(dataset1Data)
     n2 = len(dataset2Data)
@@ -879,6 +879,7 @@
     # Riassegna i vettori aggiornati
     lact_glc, lact_gln, lact_o2, glu_gln = vectors['lact_glc'], vectors['lact_gln'], vectors['lact_o2'], vectors['glu_gln']
 
+    print(vectors)
     # Create a DataFrame for the new rows
     new_rows = pd.DataFrame({
         dataset.index.name: ['LactGlc', 'LactGln','LactO2', 'GluGln'],