Mercurial > repos > bimib > cobraxy
diff COBRAxy/docs/reference/built-in-models.md @ 550:4cf00f21f609 draft default tip
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| author | francesco_lapi |
|---|---|
| date | Mon, 03 Nov 2025 14:49:49 +0000 |
| parents | 73f2f7e2be17 |
| children |
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--- a/COBRAxy/docs/reference/built-in-models.md Wed Oct 29 11:09:38 2025 +0000 +++ b/COBRAxy/docs/reference/built-in-models.md Mon Nov 03 14:49:49 2025 +0000 @@ -4,21 +4,17 @@ ## ENGRO2 (Recommended) -**Best for**: General metabolic analysis +**Best for**: Core metabolic analysis -- ~2,000 reactions, ~1,500 metabolites, ~500 genes -- Balanced coverage -- Core metabolic pathways well-represented -- **Use for**: Tissue profiling, disease comparisons, time-series analysis +- ~500 reactions, ~400 metabolites, ~500 genes +- Core metabolic model ## Recon (Comprehensive) **Best for**: Genome-wide studies - ~10,000 reactions, ~5,000 metabolites, ~2,000 genes -- Most complete human metabolic network -- Includes rare and specialized pathways -- **Use for**: Comprehensive studies, rare diseases +- Most complete human metabolic network, including all metabolic pathways ## Usage
